Streptococcus parauberis: STP_0002
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Entry
STP_0002 CDS
T01504
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta chain
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
stk
Streptococcus parauberis
Pathway
stk03030
DNA replication
stk03430
Mismatch repair
stk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STP_0002 (dnaN)
03430 Mismatch repair
STP_0002 (dnaN)
03440 Homologous recombination
STP_0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stk03032
]
STP_0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
stk03400
]
STP_0002 (dnaN)
Enzymes [BR:
stk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STP_0002 (dnaN)
DNA replication proteins [BR:
stk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STP_0002 (dnaN)
DNA repair and recombination proteins [BR:
stk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STP_0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AEF24450
LinkDB
All DBs
Position
1518..2654
Genome browser
AA seq
378 aa
AA seq
DB search
MIQFSINRSLFIQALNATKRAISSKNAIPILSTIKIEVNQENITLTGSNGQISIENTIPV
SNENAGLLISSTGSILLEANFFINIISSLPDVSLDFKEIEQHQVVLTSGKSEITLKGKDV
EQYPRLQEVSTDNPLVLETKLLKSIISETAFAASLQESRPILTGVHITLSNNKDFKAVAT
DSHRMSQRLLSLEKSANNFDVVIPSKSLREFSSVFGDDIETVEIFFSPSQILFRSEHISF
YTRLLEGNYPDTDRLLMNQFETEVVFNTQSLRHAMERAHLISNATQNGTVKLEIAANEVT
AHVNSPEVGKVNEELDTVEKSGNDLTISFNPTYLIESLKALKSDTVRIRFISPVRPFTLT
PDDNQEGFIQLITPVRTN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgattcaattttctattaatcgttccctttttatccaagcattaaatgcaactaaaaga
gctattagcagtaaaaatgctattccaattctttctactattaagattgaagttaaccaa
gaaaatattacattaactggttctaacggacaaatctctattgaaaatactattcctgta
agtaatgaaaatgctggtttattaatttcttctactggttctattttgttagaagcaaat
ttcttcatcaatatcatttcaagtcttcctgatgtttctttagattttaaagaaatcgaa
caacatcaagttgttttaacttctggtaaatctgaaattacccttaaaggaaaggatgtt
gaacaatatcctcgtttgcaagaagtttcaacagataatccacttgtattagaaacaaaa
ttattaaaatcaattatttctgagactgcttttgctgcaagtttacaagaaagtcgtcca
attctgacaggtgtccacattactttaagtaataacaaagatttcaaagcggtagctaca
gactctcatcggatgagccaacgtctcctatcacttgaaaaatcagctaacaattttgac
gttgtcattcctagtaagtcattaagagagttttcttctgtttttggtgatgacattgaa
actgtagaaatcttcttttcaccaagtcaaattttatttagaagtgaacacatttctttc
tacacaagacttttagaaggaaattaccctgatactgatcgtcttttgatgaatcaattt
gaaacagaagttgttttcaatacgcaatctcttcgtcatgcaatggaacgtgcgcatttg
atttctaatgctactcaaaatggaacagttaaacttgaaattgcagctaatgaagttaca
gcacacgttaattctccagaagttggtaaagttaatgaagaattagatactgttgaaaaa
tcaggtaatgatttaacgatttcatttaatccaacttatttgattgaatctctaaaagca
cttaaaagtgatactgttcgtattcgtttcatttcgccagtaagaccatttacactgaca
ccagatgataatcaagaaggctttattcaattaattaccccagttagaactaactaa
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