Sphaerodactylus townsendi (Townsend's least gecko): 125430498
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Entry
125430498 CDS
T08213
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain isoform X1
KO
K19479
collagen type X alpha
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
125430498
NCBI-ProteinID:
XP_048348391
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Position
LG01:118567028..118582863
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AA seq
675 aa
AA seq
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MLSGLRNMKLQISILLMLLSMNTAFGGEGYYPERYQKQSSVKGPPFLPYITKSHVLQARG
EQGPPGPPGSPGPRGQPGPAGSPGKPGYGSQGQPGPEGPPGPPGHSAVGKPGLPGLPGKP
GDRGFPGEKGDMGPAGLPGPRGLPGANGIPGPAGISVAGKQGQPGPQGQRGIPGEKGEPG
IPGINGQKGENGYGIPGRPGGRGQPGAQGPPGPPGPAGVGRPGDRGYSGHPGIKGERGLP
GTPGPVGNPGPQGISGPPGEPGIGKPGPAGPPGLPGIAGAKGLPGPSGFTGPPGLPGFGK
PGLPGMKGQRGPEGLNGIPGIKGEHGPAGAPGEPGPVGPPGPMGPQGLRGASGANGFPGA
KGERGPVGPAGFPGIKGERGFPGLEGKSGEPGEPGLPGPKGHPGLPGSKGDAGHVGSPGL
PGSMGSPGPKGTAGYNGAPGPRGPPGIPGTRGPVGPPGIPGFPGSKGEHGTPGLPGPAGI
ASRGLDGPTGPPGRQGPKGNHGEPGLPGPPGPPGPPGPAIYPEGQALAGVPVIKAGASQG
IIGMPVSAFTAMLSKAFPTSAIPIRFDQVLYNRQQHYDPRTGIFTCRIPGLYYFAYHVHV
KGTHVWVGLYKNGSPIMYTFDEYKKGYLDQASGSAVVDLMENDQVWLQLPNNESNGLYSS
EYVHSSFSGFLFAQI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtggacttaggaacatgaagttacaaatatccattcttctgatgctgctttcc
atgaacactgcctttgggggcgagggctattatcctgaacgataccaaaaacaatccagt
gtgaagggaccgcctttcttaccttacattacaaaaagccatgttttacaggctagagga
gagcaaggcccacctggtccaccaggctctcctggtccaagagggcaaccaggccctgca
gggagtccagggaaaccaggttatggcagccaaggacaaccaggaccagaagggccacca
gggccaccaggacattcggctgttggaaagccaggcctgccaggtttgccaggaaaacca
ggtgacagaggatttccaggggaaaaaggagatatgggacctgctggtctcccagggcca
agagggttaccaggagccaatggaatccctggtccagcaggaatttctgttgctggcaaa
caaggacaaccagggccacaagggcaaagaggtattcctggagaaaaaggtgaacctggc
attcctggaataaatggacagaagggagaaaatggatatggaattcctggtcgcccagga
ggaagaggacagccaggagcacaggggcctccaggaccacctggacctgcaggggtaggg
aggccaggagacaggggatattcagggcatccaggtattaaaggtgaacggggtttacca
ggcacaccaggaccagttggtaacccaggaccccaagggatttctgggcctcctggagag
ccaggaataggaaaacctggtccagctggaccaccaggattgccaggaattgcaggagca
aaaggacttccaggcccttcaggctttactggacctcctggtcttccaggatttggaaaa
cctgggctaccagggatgaagggacaaagaggtcctgaaggcctaaatggcattccagga
ataaaaggagaacacggtccagctggtgctccaggggaaccagggccagttggaccacct
gggccaatgggccctcaagggctgagaggtgcatctggtgcaaatggttttcctggggct
aaaggtgaaagaggtcctgtaggaccagcaggtttcccaggaattaaaggggagagaggt
tttccaggactagagggaaaatcaggagagccaggagagccaggacttcctgggccaaaa
ggacacccaggtttgccaggttctaaaggggatgctggccatgttgggtctcctggccta
ccaggctcaatgggttcaccaggtcctaagggaacagcaggatataatggagcaccaggt
ccaagaggcccacctggaatacctggtacaagaggtcctgttggcccaccaggtatccca
ggattccctggcagtaaaggagaacatgggacaccaggattacctggtccagctggtatc
gcatcaaggggcttagatggacctactgggcctcctggtcggcaaggtccaaaaggcaac
catggagaacctggattgccaggtcctccaggtcctccaggccctccaggaccagcaata
tacccagaaggacaggcactagcaggcgtgcctgttatcaaagctggtgcaagccaaggc
ataattggaatgccagtttcagctttcactgccatgctttcaaaagcgtttcctacatca
gcaatccctattagattcgatcaggttttgtacaatagacaacaacactatgaccccagg
acagggattttcacatgtaggattccaggactttattactttgcttaccatgtgcatgtg
aaaggaacacatgtttgggttggtctatacaaaaatggttcacccatcatgtataccttt
gatgagtataagaaaggatacctagatcaggcttctggtagtgctgttgttgatctcatg
gaaaatgatcaagtctggttgcaactacccaataatgagtcaaatggcctgtactcctca
gagtatgtccattcctctttctcaggtttcttatttgctcaaatttaa
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