Sphaerodactylus townsendi (Townsend's least gecko): 125436707
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Entry
125436707 CDS
T08213
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125436707 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125436707 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
stow03016
]
125436707 (ZCCHC7)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
125436707 (ZCCHC7)
Transfer RNA biogenesis [BR:
stow03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
125436707 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
125436707
NCBI-ProteinID:
XP_048359889
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Position
LG07:complement(100865785..101033896)
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AA seq
573 aa
AA seq
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MFGGYEDIEAFEDDIYCEESSSETSIDSEVEFHLYSQVHYAQALADVSGQEETEGAGPLE
KQIQYSVSKQDQKDNFVVISDSDIIQISDSPDVIILSDTPDEDSVYKSKLQMLTTPESPT
LERTYNHTDPISVNPSETTLDSKGSSTVTARKEKRIHRKSVSFHRDGVRMIHKILVIEDS
SSDENEDEDVTSTVSESDNESWMLLGGARDIRDENILLNLEGCGSSATEGEGGTDWAISD
KDLEAQIGNCFTVRRNNRYYMLDKNVTCRNCDKRGHLSKNCPTPKKVPPCCLCAERGHLQ
NNCPERFCFNCCLPGHYSRECLERTYWSKHCNRCAMRGHYADACPEIWRQYHLTTKPGPL
KKASSFSEHDAPVYCYNCSRRGHYGYECSEKRMFGGTFPTFPFIYYYDNKYDIKRSFRNA
KKKVQELQDAGLLPIALKRPRVDDDQKVHARKKKGKLLKEHNRRAEKHHRKKSHADKLKG
RKHKKGVQSHCPIEENFPRGGHSKAPKWHKKPSAHFDVSANGDKPEIAKASLEAAKKRKK
KKKQDYTVSSSTRDESLFLIKQRKKKSKQKPSI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtggatatgaggatatagaagcatttgaagatgatatttactgtgaagagtcc
tccagtgaaacaagtattgatagtgaggtagaatttcatctttacagccaagtgcattat
gcccaggctcttgcagatgtcagtggacaagaagaaactgaaggagctggacctctggag
aagcagattcagtattcagtgagtaaacaggaccagaaagataattttgtagtaatttca
gacagcgacatcattcaaatttcagatagtcctgatgtcatcatcttgtcagatacccct
gatgaagatagtgtttacaaaagtaaactccagatgttgaccactccagagtctccaaca
ctagaaagaacatacaatcacacggaccccatctcagttaatccttctgagactaccctg
gactcaaagggttcgtctacagtcactgcaagaaaggagaagagaattcatcggaagtct
gtctcttttcaccgtgatggtgttcgcatgatccacaagatcctggtaatagaggacagc
tccagcgatgagaatgaggatgaagatgtgacaagcacagtctctgaaagtgacaatgag
agctggatgttgttgggtggtgccagagatatcagagatgaaaacatcctcttaaacctt
gagggctgtggaagttcagccactgaaggagaaggtggaacagactgggctatcagtgat
aaagatttagaggcacaaattggtaactgctttactgtgcgtcgtaacaacagatactac
atgctggacaaaaatgtcacttgcagaaattgtgataaaagaggtcacttgtcaaaaaat
tgtcctactccaaagaaagttccaccttgttgtctgtgtgcagaaaggggtcacctgcaa
aacaactgccctgaacggttctgcttcaattgctgtttgcctggacactactcaagggag
tgcctcgagagaacttactggagtaaacattgtaaccgttgtgccatgagaggccattac
gcagatgcttgcccagaaatatggaggcagtatcacctaacaaccaagccaggaccactc
aagaaggccagctctttttctgaacatgatgctccagtgtactgttacaactgttcacgg
agaggccactatggctacgaatgttcagagaagcggatgtttggaggaactttccctact
tttcctttcatctattactatgataataaatatgatatcaagaggagctttcgaaacgca
aagaaaaaagtacaagaacttcaggacgccggccttcttcccatagcactgaagagaccg
cgtgtggacgatgaccagaaggtccacgcccgtaagaaaaaagggaaactgttgaaggaa
cacaacagaagagcggaaaagcatcacagaaagaagtcccatgcagacaaactcaaagga
aggaaacacaagaaaggcgtccaaagccactgtcccatagaggaaaacttccccagagga
ggccactcgaaagctccaaagtggcacaagaaacccagcgcgcactttgacgtttccgca
aatggggacaaaccagaaatcgccaaggcttccttggaggcagcaaaaaaacggaaaaaa
aagaaaaaacaggactacacagtcagtagctccaccagggatgaaagtttatttcttata
aaacagagaaaaaagaaatccaaacagaaacctagtatatga
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