Salinispora tropica: Strop_0269
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Entry
Strop_0269 CDS
T00504
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
stp
Salinispora tropica
Pathway
stp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Strop_0269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stp03019
]
Strop_0269
03110 Chaperones and folding catalysts [BR:
stp03110
]
Strop_0269
03029 Mitochondrial biogenesis [BR:
stp03029
]
Strop_0269
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stp04147
]
Strop_0269
Enzymes [BR:
stp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Strop_0269
Messenger RNA biogenesis [BR:
stp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Strop_0269
Chaperones and folding catalysts [BR:
stp03110
]
Heat shock proteins
HSP60 / Chaperonin
Strop_0269
Mitochondrial biogenesis [BR:
stp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Strop_0269
Exosome [BR:
stp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Strop_0269
Exosomal proteins of other body fluids (saliva and urine)
Strop_0269
Exosomal proteins of breast cancer cells
Strop_0269
Exosomal proteins of colorectal cancer cells
Strop_0269
Exosomal proteins of bladder cancer cells
Strop_0269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
Motif
Other DBs
NCBI-ProteinID:
ABP52754
UniProt:
A4X1K4
LinkDB
All DBs
Position
306170..307792
Genome browser
AA seq
540 aa
AA seq
DB search
MAKMIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVAAGANPMALKRGIE
TAVASVSEELLKLAKDVETKEQIASTASISAGDPSVGEIIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFMTDPERMEAVFDDPYILIVNSKISSVKDLLPILEKIMQ
SGKPLLIIAEDIEGEALATLVVNKVRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGQVIS
EEVGLKLDAVSLDMVGRARKVVVTKDETTIVDGAGDAEQIQGRVNQIRAEIDKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALVQA
GKTAFDKLDLTGDEATGAQIVKIALDGPLRQIAVNAGLEGGVVVEHVRGIEAGHGLNAAT
GGYVDLMAAGIIDPAKVTRSALQNASSIAALFLTTEAVVADKPEKTPAAPAGPGGGEMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatgatcgcgttcgacgaggaagctcgccgcggcctcgagcggggcatgaac
cagctcgctgacgccgtgaaggtgaccctcggccccaagggccgcaacgtcgtgctcgag
aagaagtggggcgctcccaccatcaccaacgatggtgtgagcatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgctgagctggtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcacgacgacggcgaccgtcctggcccaggccatggtccgt
gagggcctgcgtaacgtggccgccggcgccaacccgatggccctgaagcggggcatcgag
accgcggtcgccagcgtctcggaggagctgctgaagctcgccaaggacgtcgagaccaag
gagcagatcgcctccaccgcctccatctccgccggagacccgagcgtcggcgagatcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggcctggagcttgagctcaccgagggtatgcgcttcgacaagggctacatctccgcg
tacttcatgaccgacccggagcggatggaggccgtctttgacgacccctacatcctgatc
gtcaacagcaagatctcctcggtcaaggacctgctcccgatcctggagaagatcatgcag
tcgggcaagccgctgctgatcatcgccgaggacatcgagggcgaggcgctggcgaccctg
gtcgtcaacaaggtgcggggcaccttcaagtccgtcgccgtcaaggctccgggcttcggt
gaccgccgcaaggccatgctcggtgacatcgccatcctcaccggtggtcaggtcatcagc
gaggaggtcggcctcaagctggacgccgtcagcctcgacatggtgggccgtgcccgcaag
gtcgtggtgaccaaggacgagaccacgatcgttgacggtgccggtgacgccgagcagatc
cagggccgggtcaaccagatccgggccgagatcgacaagagcgactccgactacgaccgg
gagaagctgcaggagcggctggccaagctggccggtggcgttgcggtgatcaaggtcggc
gcggccaccgaggtcgagcttaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcggccgtcgaggagggcatcgtcccgggtggtggcgtcgcgctggttcaggcc
ggcaagaccgccttcgacaagctcgacctgaccggtgacgaggcgaccggcgcccagatc
gtcaagatcgcgctggacggcccgctgcggcagatcgccgtcaacgccggccttgagggt
ggcgtggtcgtcgagcacgtccgtggcatcgaggccggtcacggcctgaacgccgcgacc
ggtggctacgtggacctgatggccgcgggcatcatcgacccggccaaggtgacccgttcg
gcgctgcagaacgcatcgtcgatcgcggcgctcttcctcaccaccgaggccgtcgtggcg
gacaagccggagaagaccccggctgccccggctggcccgggcggcggggaaatggacttc
tga
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