Streptomyces sp. 4F: ASR50_15055
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Entry
ASR50_15055 CDS
T04265
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strf03032
]
ASR50_15055
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_15055
Enzymes [BR:
strf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ASR50_15055
DNA replication proteins [BR:
strf03032
]
Prokaryotic type
DNA Topoisomerases
ASR50_15055
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ASR50_15055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ALV50600
LinkDB
All DBs
Position
complement(3412645..3415479)
Genome browser
AA seq
944 aa
AA seq
DB search
MSPTSETANGGRRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPNGAAEVPDKYTGE
VRRLGVDVDHDFQPIYVVNADKKAQVKKLKDLLKESDELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKDAIREAVANPRELNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERMAFRSAEYWDLTGTFSTGRTGDASDPSTLVARLQTVD
GRRVAQGRDFDSLGQLKSANTLHLDEANARALAAALEDTRFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGYITYMRTDSTTLSETAVAAARAQVTQLYGA
DYLPPQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTSADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
AEGDALSAEEISVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEARAVPWLKRFYFGEGE
GAGSGAAADAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGNGIVLRVGRYGPYVERGE
KDTEEHQRADVPADLAPDELTVELAEELLAKPSGDFELGTDPATGHTIVAKDGRYGPYVT
EILPEGTPKTGKNAVKPRTASLFKSMSLDTVTLDDALKLMSLPRVVGVDAEGQEITAQNG
RYGPYLKKGTDSRSLQSEEQLFTITLEEALAIYAQPKQRGRAAAKPPLKELGTDPVSEKP
VVVKDGRFGPYVTDGETNATLRSGDSVETITPERGFELLAEKRAKGPAKKTAKKTAKKTT
AKKAPAKKTAAKKTTAAKKTTAAKKTTAKKTAAKKTAAANGAED
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcgaacggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggctacatcgtcgaggcgagcgtc
gggcacattcgcgaccttcccaacggcgctgccgaggttccggacaagtacaccggcgag
gtgcgccgcctcggtgtggacgtcgaccatgacttccagccgatctatgtggtcaacgcg
gacaagaaggcgcaggtcaagaagctcaaggacctgctgaaggagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcgtggcacctccaggaagtgctc
aagccgaagatcccggtcaagcgcatggtgttccacgagatcaccaaggacgcgatccgg
gaggccgtggccaacccgcgcgagctcaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgtctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccccggctgtccgccggccgcgtgcagtccgtcgccacccggctcgtggtcgagcgggag
cgcgagcgcatggcgttccgctccgccgagtactgggacctgaccggcaccttctccacc
ggccgcaccggtgacgcgagcgacccgtcgacgctggtcgcccggttgcagacggtcgac
ggacgccgggtcgcgcagggccgcgacttcgactcgctggggcagctgaagagcgcgaac
accctccacctcgacgaggcgaacgcccgcgcgctcgccgccgccctggaggacacgcgg
ttcgcggtccgctcggtcgagtccaagccgtaccgccgctcgccgtacgcgccgttccgt
acgacgacgctgcagcaggaggcgagccgcaagctcggcttcggcgcgaaggccaccatg
caggtcgcgcagaagctgtacgagaacggctacatcacttacatgcgtacggactcgacg
accctgagcgagacggcggtcgccgccgcccgcgcccaggtcacgcagctgtacggagcc
gactacctgccgccccagccgcgcacctacgcgggcaaggtgaagaacgcccaggaggcg
cacgaggcgatccgtccttcgggggaccgtttccgcacgcccgccgagaccggtctgacc
ggcgaccagttcaagctctacgagctgatctggaagcggaccgtcgcctcgcagatgaag
gacgcgaccggcaactccgtcaccgtgaagatcggcggcacatccgccgacggccgggac
gtcgagttcagcgcgtccggcaagaccatcaccttccacggcttcctcaaggcctacgtc
gagggcgccgacgacccgaacgccgagctggacgaccgtgagcgccggctgccgcaggtc
gccgagggcgacgcgctgagcgccgaggagatctcggtcgacgggcacgccaccaagccc
ccggcccgctacaccgaggcgtcgctggtcaaggagctggaggagcgggagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctcgaccgcggctacgtgttcaagaag
ggcacggccctggtgccgtcgttcctctccttcgccgtggtcaacctgctggagaagcac
ttcggccggctcgtcgactacgacttcaccgcgaagatggaggacgacctcgaccgcatc
gcgcgcggcgaggcccgcgccgtgccgtggctgaagcgtttctacttcggcgagggcgag
ggcgcgggcagcggcgccgccgccgacgccggcaacggcgacggggaccacctcggcggt
ctcaaggagctggtgaccgacctgggtgcgatcgacgcgcgcgaggtgtcgtcgttcccg
gtgggcaacggcatcgtgctgcgggtcgggcgctacggcccgtacgtcgagcgcggcgag
aaggacaccgaggagcaccagcgtgccgacgtcccggccgacctggcgcccgacgagctg
accgtcgagctggccgaggagctgctcgccaagccgagcggcgacttcgagctgggcacg
gacccggcgaccgggcacacgatcgtcgccaaggacggccggtacggcccgtacgtgacg
gagatcctgcccgagggcaccccgaagaccggcaagaacgcggtcaagccgcgcaccgcg
tcgctcttcaagtcgatgtccctggacacggtgacgctcgacgacgcgctgaagctgatg
tcgctgccgcgcgtggtcggcgtggacgccgagggccaggagatcaccgcgcagaacggc
cgctacggcccgtacctgaagaagggcacggactcgcggtcgctgcagtcggaggagcag
ctcttcaccatcacgctggaggaggctctggcgatctacgcccagcccaagcagcgtggc
cgggccgcggccaagccgccgctgaaggagctgggcaccgacccggtcagcgagaagccg
gtcgtggtgaaggacggccgcttcggcccgtacgtcaccgacggcgagaccaacgcgacg
ctgcgctcgggcgacagcgtggagacgatcacgccggagcgcgggttcgagctgctggcc
gagaagcgcgccaaggggcccgcgaagaagacggcgaagaagaccgccaagaagacgacg
gccaagaaggccccggccaagaagacggcggcgaagaagacgaccgcggcgaagaagacc
acggccgccaagaagacgacagcgaagaagaccgccgccaagaagacggccgcggcgaac
ggcgcggaggactga
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