Peterkaempfera bronchialis: C7M71_006890
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Entry
C7M71_006890 CDS
T05561
Name
(GenBank) RNA polymerase sigma factor SigJ
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
stri
Peterkaempfera bronchialis
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stri03021
]
C7M71_006890
Transcription machinery [BR:
stri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C7M71_006890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
DUF1707
Motif
Other DBs
NCBI-ProteinID:
AXI77202
UniProt:
A0A345STZ7
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Position
complement(1578518..1579381)
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AA seq
287 aa
AA seq
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MDAFEAQRRYLGAVAYRLLGSVTDAEDVVQEAWLRWQAVDWSQVADVRAYLTTVVTRLCY
DLLGSARARRESYYGEWLPEPLVTDDGESPAERAELGEEVSLAVLAVMEQLTPAERAAFV
LHDLFAVGFGEIAAALDRTPDAVRQLASRARRRVREGGRRGTVDPAEHRRAVSAFAAATA
QGDLAGLMAALDPEVVWHSDGGGIVSAGVRPIRGAERVARLVAGLAARWLAPESGASFGF
ARVNGEPGVVWYESPGRVGGVLAFTVADGRITEVHIVVNPEKLAHLV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcgttcgaggctcagcggcgctatctgggggcggtggcgtaccggctgctgggc
tcggtcaccgatgccgaggacgtggtgcaggaggcgtggctgcgctggcaggcggttgac
tggtcgcaggtggcggatgtccgggcgtacctcaccaccgtggtcacgcggctctgctat
gacctgctcggctccgcccgggcccgccgggagtcgtactacggcgagtggctgcccgag
ccgttggtcaccgatgacggggagtcgcccgccgagcgggccgagttgggggaggaggtg
tcgctggccgtgctggcggtgatggagcagctcaccccggccgagcgggcggcgtttgtg
ctgcacgacctgttcgcggtcggcttcggtgagatcgccgccgccctcgaccgcaccccc
gacgccgtccgacagctggcctcccgagcccgccgacgggtccgggagggcggccggcgc
ggcaccgtcgacccggccgagcaccgccgggccgtcagcgcctttgcggcggccaccgca
cagggggacctcgcgggcctgatggcggcgctcgaccccgaggtggtctggcactcggac
ggcggcggcatcgtctcggccggcgtgcggccgatccggggcgccgagcgggtggcccgg
ctggtggccggactggccgccaggtggctcgccccggagtcgggtgcctcgttcggcttc
gcccgggtcaacggcgagccgggggtggtctggtacgagtccccgggccgggtcggcggc
gtgctcgccttcaccgtcgcggacggccggatcaccgaggtgcatatcgtggtcaacccg
gagaagctcgcccacctggtgtga
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