KEGG   Streptomyces sp. Mg1: M444_25715
Entry
M444_25715        CDS       T03958                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
strm  Streptomyces sp. Mg1
Pathway
strm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:strm00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    M444_25715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:strm03021]
    M444_25715
Transcription machinery [BR:strm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M444_25715
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1 CDC27
Other DBs
NCBI-ProteinID: AKL68256
UniProt: A0A0G3URH6
LinkDB
Position
1:5886759..5888327
AA seq 522 aa
MFVSASTSRTLPPEIADSESVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSL
NQILEEEGVTLMVSAAESPKRAPRKSVAAKSPAKRTATKTVAAKTAAPPAAAPEADPAEP
DTAAAQAVEPGTEAPAKKTAAKKTTAKKTAAKKTTAKKTAAKKTAAKKDADEAGDEESAE
DAPGAAKAEGDEEEEGGESKGFVISDDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLN
AEQEVELAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSL
AKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTI
RIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTP
LGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQP
KTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1569 nt   +upstreamnt  +downstreamnt
ttgttcgtgtcggccagcacatcccgtacgctcccgccggagatcgccgattccgagtct
gtgatggcgctcatcgagcggggcaaggccgaggggcagatcgccggcgatgacgtgcgt
cgggccttcgaggctgaccagattcctgcgacccagtggaagaatgttctgcgcagcctc
aaccagatcctggaggaagagggtgtgacgctgatggtcagtgccgcggagtcgcccaag
cgcgccccccgcaagagcgtcgcagcgaagagcccggccaagcggacggccacgaagacc
gtggcggcgaagacggccgcgccgcccgccgcggccccggaggccgacccggcggaaccg
gacacggcggccgcccaggcggtagagcccggaaccgaagcgcccgccaagaagacggcc
gcgaagaagacgacggccaagaagaccgccgcgaagaagaccaccgccaagaagacggcg
gcgaagaagaccgcggccaagaaggacgccgacgaggccggcgacgaggaatccgccgag
gacgcgcccggcgcggccaaggccgagggcgatgaggaagaagagggcggggagagcaag
ggcttcgtcatctccgacgacgaggacgacgcccccgcccagcaggtcgccgtcgccggc
gccaccgccgaccccgtcaaggactacctcaagcagatcggcaaggtgccgctcctcaac
gccgagcaggaggtcgagctcgccaagcgcatcgaggcgggcctgttcgccgaggacaag
ctggcgaactccgacaagctcgcgcccaagctcaagcgcgagctggagatcatcgccgag
gacggccgccgcgccaagaaccacctgctggaggccaacctccgcctcgtggtctccctg
gccaagcgctacaccggccgcggcatgctcttcctggacctgatccaggagggcaacctg
ggtctgatccgcgcggtcgagaagttcgactacaccaagggctacaagttctccacctac
gccacgtggtggatccgccaggcgatcacccgcgccatggccgaccaggcccgcaccatc
cgcatcccggtgcacatggtcgaggtcatcaacaagctcgcccgcgtgcagcgccagatg
ctccaggacctgggccgcgagcccaccccggaggagctggccaaggaactcgacatgacc
cccgagaaggtcatcgaggtccagaagtacggccgcgagccgatctccctgcacaccccg
ctcggcgaggacggcgacagcgagttcggcgacctgatcgaggactccgaggcggtcgtc
ccggccgacgcggtctccttcaccctcctccaggaacagctgcactcggtgctcgacacc
ctcagcgagcgcgaggcgggcgtggtctcgatgcgcttcgggctcaccgacggccagccc
aagaccctggacgagatcggcaaggtctacggcgtcacgcgtgagcgcatccgccagatc
gagtccaagaccatgtcgaagctgcgccacccgtcccgctcgcaggtgctgcgcgactac
ctcgactga

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