Salmo trutta (river trout): 115162910 Help Entry 115162910         CDS       T08542                                  Name (RefSeq) cadherin-23-like isoform X1   KO K06813   cadherin 23 Organism stru  Salmo trutta (river trout) Brite KEGG Orthology (KO) [BR:stru00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:stru03037]     115162910    04515 Cell adhesion molecules [BR:stru04515]     115162910 Cilium and associated proteins [BR:stru03037]  Primary cilia and associated proteins   USH complex and associated proteins    115162910 Cell adhesion molecules [BR:stru04515]  Cadherins   Major cadherins    115162910 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Sde0182_C Bact_surface_Ig-like Motif Other DBs NCBI-GeneID:  115162910 NCBI-ProteinID:  XP_029570283 Ensembl:  ENSSTUG00000027045 LinkDB All DBs Position 2:74309554..75021683 Genome browser AA seq 3370 aa AA seqDB search MLWSVDFGGRMTVAKLLLSFFILNSFCEASNQPPRFQNYFFHSYLLIYENTPVGTSVTQL QAVDPDQEPLIFGVVGEEAMRYFAVERDTGVVWLRQPLDRETKSEMQVEFFVSDSQGVVK DTVNIQIGDVNDNSPTFHGQPYTVHIAENTPVGTSVYQVNATDPDQGTGGSVLFSFQPPS SFFSIDGARGTVTVTRALDYETTSAYQLTVNATDQDKKRPLSSLSNLAITITDVQDMDPI FTNLPYSTNIGEDVPPGYEVRKIRAIDQDLGRPRGIGYTIISGNTNSIFALAYISGSLTV NGQLDRENPLYSSGFTLTVKGTELNDDRTPTDASVMTTFTILLIDKNDNAPKFNSSEYRV RITELAQVGFALPLFIQAEDKDEGVNSMFQVFLTGNNSAHFTISPTAVQGRADIRMRVDV PLDYENIQSYSFSLYANESISEHVGFARIYIDLINENDNRPIFLKPLYNISLPENTPRGT SLLRIQATDGDFGTFGTVRYYFSDEPDQFSLDTETGWVHLWGNLDYELMRRFTLTVLARD GGGEETTGRLWVNVLDVNDNTPLFQKEAYMGSLRENEQAAQQVARVRATDEDSPPNNFLT YTITSVSAFRGYFRITMVEGYAAISVNSPLDYEMVPEGMIYLTVMAKDGGNPALNSSVSV TIELFDENDNPPKFSKPSYLVKIPENIIAGATVVFVNATDLDASREFGQASLIYSLQGSS QFRLNTRSGEITTTALLDRELKSEYILIVRAVDGGVGPLQKTGIATVNITILDINDNAPM WRDEPYHANVVEMSPIDTDVISVLAIDPDVGDNGTVVYSISPENPFYTINSNTGKIRTSG AVLDRERSNPKDILLMRTIIVSAVDLGRPPLRSSVSTTVYVNLLDLNDNDPIFLNLPFVA EVPEGLPSGSSVFKIQVEDPDQEENGMVTMGLLVGIPRVDFYLNTTTGVLYSMATLDREQ ISLYHLRIVAYDQGQNPRTSTSTLTITVLDANDETPTFFPKVYNVSLQESVPRDHVVARL NCSDNDAGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVGLDRETQATYSLVIEAIDNGP AGSRRTGTATVFVEVLDVNDNRPIFLQNSYETSILENVPIGSSILQVQATDSDQGENGRV LYRILSGNSKGLFRINELSGLVMRGQRALDRESSSSHVLEVEAYNSDQGRMRSSVRVIVY VEDANDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYALDSGSDRKFD VDVSTGLVTTVDYLDYETKTSYLMNVSATDQAPPFHRGFCMVYVTLLNELDEAVAFFSAG YEVSLLENIATGTEVVQVQAKSADNLNQLSYRFDPDTSPAALALFKIDSITGRITVTGLL DREKGDLYTLTVVADDGGPKKDSTVKVSITIQDENDNSPEFDITSDSLVEIPENTPIGKR VAVVLGRDKDAGKNGLVYFRLVAGNMQDVFEIRTVNHTYGEIYVNSPLDRESVDRYLLKV RAMDSGVPPRYRDLPLIINILDVNDNTPVIESQGGYNVSVNENVGGGTSVLRVVATDRDI GPNAMLFYYITSGNKDLTFRMDRMTGEMVTRPSPPDRERQQEYRLIMMVEDDGTPSLSSS TTIYVRIVDENDNAPEFPEEEYVTVLSEGPNTVGAIIATVTAIDPDEGLNGTLRYAIDHG NLAITFHINHTTGRIVAVKELDFEISNGHYALIVTATDQCPIHALRLTSSTTVLVNVLDV NDVTPTFPKPYEGPFEITEGQPGPRVWTLKAIDQDSGLNGKVEYSITAGDPQNEFVVSPV EGELRVRRDVELDRETTPFYNITVMAKDLGNPPRTSIVVVGVHVLDINDNDPMLLNLPHN TSVREGASIHTSVTTVQARDMDSGRNALLTYNITAGNHDGAFYINDTTGMVQVNRPLDRE RVGEYRLTITVKDNPENPRIARRDSDMLVITVLDDNDNRPIFTQTSYRAEITENSPSGTA VSVLNGPVLAEDKDIGPNSVVRYRLLGTRLDLFTVDSDTGVVRVRQKALLDREAFVEPRM ELLLVGEDVGGLNSSVPLTVTIMDQNDNPPVFNPPSLTVHLPENSPTGVVVTQLSASDAD SGSNAWLLYRLESGAQDRFVVDSLSGAVLVGNATLDREERGSYRLVVVATDRGTPSLSGT ATLSVILDDVNDSRPRFLEPVTTININESTPPGVVVATLAAKDPDLRPRLEYYIISVEAK DDGNNPVVGLQESFGIDFHTGAVFVRNPLNRELVATFEILVSVHDNASDVIDMSVSVPNA RLIVNVLDVNDNAPRFRPFGVANFSEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLH LPRGDYLRLEDPSTGKIVAYRTVDFEQVQWLNFTVRAQDHGSPPRVAELPVYLRIVDVND NNPIFKQPSYQKPVFEDVDLGTVIVRVSATDADSGLFSVIEYSLVDGEGKFGITPSTGDI YILSPLDRETKDHFTLTAIARDNPGGSPNNRRENSVQVLVTVLDVNDFRPRFSERVFETS VFENEPSGTSVITLTATDLDEGQNGLLSYSMQGPGADAFSLDADTGLVRSLRLLQSFEHF NLTVVATDQGRPPLWGTATLHIIVIDVNDNRPMFVRPTNGTIMHIMEEQPPGLLVYEVFA TDGDEGVNGEVRYAFLQTGAGNRDWDNFHIDAITGVITTTIKLDREKQALHSLIIVAYDL GQPVPYETTQPLQVALLDIDDNEPVFFKPPRGSLPYQTLSVAEHSTPGTVVGNVTGAVDA DEGSNAVVYFFIAGGDTEGNFGLSPGGVLKVKKDLDREDISVYSIIVKASSHRNWAPTRG QRSAWGRALDPSRDPTLQEVRIYLEDINDQPPRFTKLEYTTGVAADAKVGSDLIRVQAID NDVGNNSLVLYHVLSIRYIKLQSNDTEDIGNGFIIGETDGIIRTFDLFTAYDPGYFVVEV LARDLAGHSDIAMVGIYILRDDQRVKIVINEIPERVRQFQEEFINLLSNITGAIVNTDDV QFHVDKKGRVNFAQTDVLIHVVNKHTNRILDVEKVIQMIDENKEQLKNLFRNYNILDVQP AVSGRAPDDLTTLQMAIIILAVLLFLAAMSFIFMNWYYRTVHKRKLKAIVAGSTGKQGLM DILDLPNTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPENLSEITDLWNSPAPTHGT FGREPKDKPEDDRYLRAAIQEYDNIAKLGQIMREGPVKGTLLNVVLDDYLRLKKLFAARL VTKSTSQGDQSSVTELIQSDLDDDEDERVGMGGSWGTMRFKHKLPVEMRGPDGVHVVHGS MGTLLTSDHNNLPEDNQLALARSMEALDATDSGLYAKHNARTESAKSTPLHHNNKDDDTL SESPLEITEL NT seq 10113 nt NT seq  +upstreamnt  +downstreamnt atgttgtggagtgtggatttcggtggcaggatgacggtggccaagcttctcctatccttc ttcatcctaaactccttttgcgaagcctccaaccagcctccacgcttccagaactacttt ttccactcctatcttctcatctacgagaacacaccagtcggcacgtcagtgactcagctg caggcggtggacccagaccaggagcccctcattttcggggtagtgggagaggaggccatg aggtactttgcagtggagagagacactggagtagtgtggctacgacagcccctggaccgc gagaccaagtcggagatgcaggtggagttctttgtgagtgacagccaaggggtggtcaaa gacacagtgaatattcagataggagatgtgaatgacaactccccaactttccatggccag ccgtacacagtacacattgcagagaacactccagtgggcacctcagtgtaccaggtgaat gccacagacccagaccaaggcacggggggcagtgtgctcttctcttttcagcccccctct tcttttttctccatcgatggagcccgtggtacggtcactgtcaccagggctctggactat gagaccacatcggcctaccagctcactgtcaatgccacggaccaggataagaagcgccct ctgtccagtctatctaatttagccatcaccatcactgatgttcaggacatggaccccatc tttaccaacctaccctacagcaccaacataggggaggacgtcccaccgggctatgaggtg cgcaagataagagccattgaccaggatctggggagaccgagaggcatcggctacaccatc atctcaggcaacaccaacagcatctttgctctggcctacatcagtggctctttgacggtg aatggacagctggacagagagaaccccctctactcatccggattcactctaaccgtcaag ggcacagagttgaatgatgaccgtaccccgacggatgcctcggtgatgaccaccttcacc atcctgctgattgacaagaacgacaatgcgcccaagttcaacagctccgagtaccgagtg cgtatcactgagctggcccaggtgggtttcgccctacccctcttcatccaggctgaggac aaggatgagggagtgaacagtatgtttcaggtgttcctaacggggaacaactcggctcac ttcaccatctcacccacagcggtgcagggccgtgctgacatcaggatgagggtggacgtg cctctggactacgaaaacatccaaagctacagcttctctctatatgccaatgagtccata tcagaacatgtgggttttgcccgtatctacattgacctgatcaatgagaatgacaaccgg cccatcttccttaaacccctgtataacatcagtctgcctgagaacacacccagaggaacc tccctgctacgcatccaggctacagacggtgactttggcacgtttgggacagtgcggtat tacttcagtgatgagcctgaccagttttcattggacactgagacaggctgggtgcatctg tggggcaatctggactatgagctgatgcgtcgattcactctgaccgtgctggcccgggac gggggtggggaggagaccacgggcaggctgtgggtcaacgttctggatgtcaatgacaac acaccccttttccagaaggaggcctacatgggctcactgagagagaacgaacaggccgcg caacaggtggcccgagtcagggcgacagatgaggactctccccctaacaacttcctgacc tacaccatcacatcagtgtctgcgttccgtggttacttcagaatcaccatggtggagggc tacgcagcgatcagtgtgaacagccctctggactacgagatggtccctgaaggaatgatc tacctgactgtgatggctaaagacggcgggaacccagcccttaacagcagtgtctctgtc accatcgagctgtttgatgagaatgacaacccgccaaagttcagcaagccgtcctacctc gtcaagatccctgagaacatcattgcaggggcgacggttgtgtttgtgaatgccactgat ctggacgcctcccgggagtttggacaggcctcactcatctactctctacagggctcctcc cagttccgcctcaacacgcgctcaggagagatcaccactacagccttactggacagagag ctgaagtcagagtacatcctgattgtcagagctgtggatggaggggtggggccactgcaa aagactggcattgccacggtgaacatcaccatcctggacatcaatgacaatgcccccatg tggcgagacgagccctatcacgccaacgtggtggagatgagccccatcgacactgacgtc atctctgtgctagcgatagacccagatgttggggacaatgggacagtggtgtacagcatc agcccagagaaccccttctacaccatcaacagcaacacgggcaagatcaggaccagcggg gccgtgctggacagagagaggtccaacccaaaagacatcctgctcatgaggaccatcatc gtgtctgctgtcgatcttggcagacctccactgcgttcctcagtcagcaccacggtgtac gtcaacttgctggaccttaatgacaatgaccccatcttccttaacctgccctttgtggcc gaggtgccagagggcctgcctagtggatcctctgtgttcaagatccaggtggaggaccct gatcaggaggagaatggtatggttaccatggggctactggtgggcataccacgcgttgat ttctatctcaacaccaccacgggcgtgctgtactcaatggcaactctggaccgcgagcag attagcctgtaccacctgaggatcgtggcgtacgaccaagggcagaacccacgcacctcc accagcacccttaccatcacagtcctagatgccaacgacgagacccccaccttcttcccc aaggtgtacaacgtgtccctgcaggagagcgtccccagggaccatgtggtggctcgcctc aactgctctgacaatgacgccggccttaacgccgagctcagctacttcatcacaggtggt aaccaggatggtaaattcagtgttggcttcagagatggtgtggttcggactgtggttggc ttggacagagagacacaggctacatactcactggtcatagaggctatcgacaatggtcca gcaggcagcaggaggacaggcacagccacagtgtttgtagaagtactggacgtgaacgac aacagacccatcttcctccagaacagctacgagaccagcatactggagaatgtccccata ggatccagcatcctgcaggtgcaggccacagattcagaccagggggagaacggcagggtt ctgtacaggatcctctctggcaacagtaagggtctgttcagaattaatgagctgtcgggc cttgtgatgcggggccagagggctctggacagagagagcagcagctcccacgtgctggag gtagaggcctacaacagtgaccagggcaggatgaggagctccgtacgggtgatagtgtat gtggaggatgccaatgacgaggcaccagtgttcacccagcagcagtacaaccgcctgggt ctgagggagaccgctggcattggcacctctgtcatcgtagtacgagctacagaccctgac actggtgacggcggggcggtggcctacgccctggactccggctccgaccgtaagtttgat gtggacgtgagcacgggcctggtgaccactgtagactacctagactacgagaccaagacg agctacctgatgaacgtgtcagctaccgaccaggcgccaccgttccaccgtggcttctgc atggtctacgtgaccttacttaatgagctggacgaggcggtggcgttcttctctgcgggc tacgaggtgtcactcctggagaacatcgccacaggaacggaggtggtgcaggtgcaggca aagtcggcggacaacctcaaccagctgtcgtatcgctttgacccggacacatcgccagcc gcacttgccctcttcaagatcgacagtatcacgggccgtatcacagtcacagggctgctg gacagggagaagggggacctctacaccctgactgtagtggctgacgatgggggacccaaa aaagactccactgtgaaggtgtcaatcaccatacaggatgagaatgacaacagtccagag tttgatatcacatctgattcattggtggagattccagagaacacacccatcgggaagaga gtggctgtggtgcttgggcgcgacaaagatgccgggaaaaatggactggtgtacttcagg ctggtggcagggaacatgcaggatgtgtttgagatccggacagtgaaccacacctatgga gagatctacgtcaactcccctctggaccgagagtctgttgaccgctacctgctcaaggtg cgtgccatggacagcggcgtgcctccccgctacagagacctccctctaatcatcaacatc ctggacgtcaatgataacacacccgtcatcgagagccaggggggctacaatgtcagcgtc aacgagaatgtgggaggcggtacgtccgtcctgcgcgtggtggccacagaccgtgacatc gggcccaacgccatgctcttctactacatcacctcgggtaacaaggacctcaccttccgg atggaccgcatgactggcgagatggtgacccgaccatccccacctgaccgcgagcgccag caggagtaccggctgatcatgatggtggaggatgacggcacaccgtcactatcgtcatcg accaccatctacgtgcgtatagtggatgagaacgacaacgcgccagagtttccagaggaa gagtatgtgacggtgctgagcgagggccccaacaccgtgggtgccattattgccacggta accgccatcgacccagacgagggcctcaatggcaccctgcgatatgccatcgaccacgga aatctggccatcaccttccacatcaatcacactaccggaaggattgttgcagtgaaggag ctggactttgagatcagcaatggacactacgcacttatcgtcacagcaacggaccagtgt cccatccatgccctccgcctgacttccagcaccacggtgttggtgaatgtcctggatgtg aacgatgtgacccccaccttccccaagccctatgaggggccctttgagataacagagggc cagccggggccccgggtctggaccctcaaagccatcgaccaggactctggactcaacggc aaagtggagtacagcatcactgctggagacccccagaatgagtttgtggtatctccagtg gagggagagctgcgtgtgaggagagatgtggagctggacagagagaccacacccttctat aacatcactgtcatggccaaagacctgggaaacccaccacgcaccagcattgtggtggtg ggtgtccatgtgctggacatcaatgacaacgaccccatgctgttgaacctgccccacaac accagtgtaagagagggggcgtccatccacacctcggtgaccacagtccaagcacgggac atggacagtggacgcaacgccctgctcacctacaacatcactgccggaaaccacgatgga gctttctacatcaatgacactacagggatggtgcaggtgaacaggcctctggacagagaa agggtgggggagtacagactgaccatcaccgttaaagacaaccctgagaatccccgcatc gctcgccgggactcagacatgctggtgatcacagttctggatgataatgacaacaggccc atattcacacagaccagctaccgggctgagatcactgagaactccccctcaggcactgct gtgtcagtgttgaatggaccagttttggctgaggacaaagacattgggcccaactctgtg gtcaggtaccgtctgctgggaacaagactggacctcttcactgtggactctgatacaggt gtagtgcgtgtgcgacagaaggctctgttggaccgcgaggcgtttgtggagccgcggatg gagctgctcctggtgggggaggatgtgggagggctcaacagcagtgtacccctcactgtg acaatcatggaccagaacgacaaccctcctgtctttaacccccccagcctcactgtgcac ctccctgagaacagccccactggtgtggtggtgacccagctgtctgccagtgacgctgat tcaggctctaatgcctggctgctttaccggctggagagtggtgcccaggaccgcttcgta gttgactccctctctggtgccgtcctggtgggcaacgccaccctcgaccgcgaggagcgt ggctcctaccgcctggttgtcgtggctactgaccgtggcacaccctcattgtcgggcacg gccaccctgtcggtcatcctggatgacgtcaacgactcacgaccacgtttcctggaaccc gtgacaactattaacataaacgagtctacaccgccgggcgtggtggtggcaacactcgcc gcgaaggaccctgacctacgaccccggctggaatattacataatctctgtggaggcgaag gatgatggaaataaccctgttgttgggctgcaagagtcattcggcatcgatttccacaca ggtgctgtgtttgtgcgtaacccactcaacagagagctggtggccacctttgagatcctt gtgtcggtgcatgacaacgccagtgatgtcatcgacatgtcagtcagcgtacctaatgcg agactgatagtgaacgtgctggatgtgaatgacaacgccccgcggttcagaccctttgga gtggccaacttctcagagaaaattctggaaggcgctcagcccggcaccactctgctgtcc gtgtcagctgtggacccagacaaaggccctaacggacaggtcatctaccagctgctacac ctgcccagaggggactacctcagactggaggacccctcaactggtaagatcgtagcctac cggacggtggactttgagcaggtgcagtggctgaacttcacagtgagagcccaggaccac ggcagtccacccagagtggctgagcttcctgtctacctgcgtatagtagatgtcaatgat aacaaccccatctttaaacaaccctcttaccagaagccagtgtttgaggatgttgacttg ggcacggtcatagtcagagtcagtgccacagacgcagactctggcctcttctctgtcatc gagtacagcctagtagatggagagggcaagtttggcatcactccctccactggtgacatc tacattctgtctccactggacagagagactaaagaccacttcaccctgacagccatcgct agggacaaccctggcggcagccccaacaaccgacgagagaactctgttcaggtcttggtg accgttctggatgtgaatgacttccgtccgcgtttctcagagcgggtctttgagaccagt gtgtttgagaacgagcccagtgggacgtctgtgatcacgctgactgccactgatttggac gaggggcagaacggcctgctttcttacagcatgcagggcccaggggcagatgccttctct ctggacgctgacacaggtctggtgcgttctctccgtctgctgcagtcctttgagcacttt aacttgacggtggtggctacagaccagggcagaccacccctctggggcaccgccacctta cacatcatcgtcatagacgtcaacgacaacaggcccatgttcgtcaggcccaccaacggc accatcatgcacatcatggaggagcagcccccaggcctgctggtgtatgaggtgtttgcg acagatggggatgaaggggtgaatggagaggtgcgctatgcattcctccagacaggagct gggaacagagactgggataacttccacattgatgctattacaggagtcatcaccaccacc atcaaactggaccgagagaagcaggccctgcacagtctgattattgtggcctatgacctg ggtcagcccgtgccttatgagaccacccagcccttacaggttgcgctgttggacattgat gacaacgagcctgtcttctttaagcccccgcgaggcagcctgccgtaccagactctgtct gtggcagagcactctactccagggacagtagtgggtaacgtgacaggagctgtggacgca gatgaaggctccaatgctgtagtctacttcttcatagcagggggagatactgaaggtaac tttggcctgagcccagggggcgtactgaaggtgaagaaggatctggaccgtgaggacatc tcagtgtactccatcatcgtcaaggcctcgagccacaggaactgggcccctactaggggt caaaggtcagcctggggaagagcacttgaccccagccgtgacccaaccctacaggaggtc agaatctacctggaggacatcaacgaccagccaccgcgcttcaccaagctagagtacact acaggtgtggctgctgatgccaaggtaggctcagatctgattcgggtacaggccatagac aacgatgtagggaacaacagcctggtgctgtaccatgtcctgtccatccgctacattaaa ctccagtccaatgacactgaggacataggaaacggctttatcataggagagacagatggg atcatccgtacctttgacctgttcacggcttacgacccgggctacttcgtggtggaggtg ttggcacgggacctggcaggccacagtgacatcgccatggtgggcatctacatcctgcgg gacgaccagcgggtgaagattgtcatcaacgagataccagagcgggtacgacagttccag gaggagtttatcaacctgctgtccaacatcaccggagccatagtcaacacggacgatgtg cagttccacgtggacaagaagggcagagtgaactttgcccaaacagatgtgctcatacac gtggtcaacaagcacaccaaccgcatcctggatgtggaaaaggtgattcagatgattgat gagaacaaggaacagctgaagaacctgttcaggaattacaacatcctggatgtacagcct gccgtcagcgggagagcacctgatgacctcactacgctacagatggccatcattatctta gctgtgttgctcttcttggcagccatgtcattcatcttcatgaactggtactatcgcaca gtacacaagaggaagctgaaagccattgtagcaggatccacagggaagcaaggtctcatg gacatcctggatttgcccaacaccaataaatactcatttgagggggccaaccctgtgtgg ctagacccgttctgtcggaacctggagctagctgcccaggcagagcatgaagacgacctg ccggaaaacctcagtgagatcactgacctgtggaacagccctgctcctactcacggaaca tttggccgcgagccgaaggacaagcctgaggatgaccgttacctgagagcagccatccag gagtatgacaacatcgccaagctgggccagatcatgagggaggggcccgttaagggcaca ttgctcaatgtggttctggacgactacctgaggctcaaaaagctctttgcagccagactt gtcaccaagtcgaccagccaaggcgaccaatcgtcagtcacagagctgatccagagtgac ctggatgatgacgaggatgagcgagtgggcatgggtggcagctggggcacgatgcgcttc aaacacaagctccccgtggagatgaggggacccgacggcgtgcacgttgttcacggcagc atgggcacgctcctgacctctgaccacaacaatctgcctgaggacaaccagctggccctg gcgcgctccatggaggcgcttgacgccaccgacagtgggctgtacgccaagcacaatgcc cgtaccgagtcagccaagtccacgccgctgcaccacaacaacaaggacgatgacacactg tccgagagcccgctggagatcaccgagttatga

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