Streptomyces qaidamensis: A4E84_09565
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Entry
A4E84_09565 CDS
T04777
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stsi
Streptomyces qaidamensis
Pathway
stsi00040
Pentose and glucuronate interconversions
stsi01100
Metabolic pathways
stsi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A4E84_09565
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4E84_09565
Enzymes [BR:
stsi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A4E84_09565
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AMW09726
UniProt:
A0A143BWX9
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Position
complement(2187993..2189279)
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AA seq
428 aa
AA seq
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MRGGQLAVAAGLLAVLCVPAHAEARDIGRDTLPANDGWAAEGAGTTGGAAADAGHVYTVT
DRAGLVRALDGGSDTPKIIKIAGTVDANTDDDGARLDCADYATGGYALKKYLAAYDPRTW
GSAKPSGPQEEARQASAARQAERIVLPVGSNTTLVGLGDSAVLKGASLQVRNADNVIIRN
LDVRDAYDCFPVWQPNSGGLGDWKTAYDNIWLTGATHVWVDHVTLSDKGHPDAKEPTHFA
RNYLRHDGLLDITNGSDLVTVSWSRFAGHDKAMLIGSGDTATGDRGRLRVTLHHNAFESV
VQRAPRVRFGQVHVYNNRYDITGDDYRYSLGVSTESRMYAENNAFHTPGHVEVADLVKSW
NGSALHQSGTLFNGFPVDLLAIHNAYNSGSERDLTADVGWTPTLHGRIDSAREADRAVAR
GAGAGRIP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggacaactggccgtcgcggccgggctgttggcggtgctctgcgtgcccgcg
cacgccgaggcccgggacatcggccgcgacaccctccccgcgaacgacggctgggccgcc
gagggagcgggcaccaccggaggcgcggcggccgacgccggccacgtgtacacggtcacc
gaccgggccggactggtccgggccctcgacggcggcagcgacaccccgaagatcatcaag
atcgccgggacggtcgacgccaacaccgacgacgacggcgcccggctggactgcgccgac
tacgccaccggcggctacgccctgaagaagtacctcgccgcctacgacccccgcacctgg
ggctccgccaagcccagcggcccccaggaggaggcccgccaggcctccgccgcccggcag
gccgagcggatcgtgctgcccgtcggctcgaacaccactctcgtcggcctgggcgactcg
gccgtcctgaagggcgcgagcctccaggtgaggaacgcggacaacgtgatcatccgcaac
ctcgacgtgcgcgacgcctacgactgcttccccgtctggcagcccaactccggcggcctc
ggcgactggaagacggcctacgacaacatctggctgaccggcgccacccatgtgtgggtg
gatcacgtgaccctgagcgacaagggccacccggacgcgaaggaacccacccacttcgcc
cgcaactacctgcgccacgacggcctgctggacatcaccaacggctccgatctcgtcacc
gtctcctggagccgcttcgccggccacgacaaggcgatgctcatcggcagcggcgacacc
gccaccggcgaccgcggcaggctccgggtcaccctgcaccacaacgcgttcgagtccgtc
gtccagcgcgccccgcgcgtccgcttcggccaggtccacgtctacaacaaccggtacgac
atcaccggcgacgactaccgctactcgctcggcgtctccaccgagtcacggatgtacgcc
gagaacaacgccttccacacacccggccacgtggaggtcgccgacctggtcaagagctgg
aacggcagcgccctgcaccagagcggcacgctcttcaacggcttcccggtcgacctgctc
gccatccacaacgcctacaactcgggcagcgagcgcgatctgacggccgacgtcggctgg
acgcccaccctgcacgggcggatcgacagtgcccgggaggccgaccgggcggtggcccgc
ggcgcgggtgcggggaggatcccatga
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