Streptococcus thermophilus JIM 8232: STH8232_0504
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Entry
STH8232_0504 CDS
T02026
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
stu
Streptococcus thermophilus JIM 8232
Pathway
stu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STH8232_0504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stu03019
]
STH8232_0504
Messenger RNA biogenesis [BR:
stu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STH8232_0504
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
RRF
KH_2
IML1
Motif
Other DBs
NCBI-ProteinID:
CCC19236
LinkDB
All DBs
Position
404628..406235
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AA seq
535 aa
AA seq
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MINMIILVVFALIGLVVGCLAISIKLSKAKEQAETILLKAEQDAVNLRSQAEHDADYLRV
TAERESKAQRKELLLEAKEKARKYREDIEEEFKSERQELKQMENRLTERATSLDRKDENL
SSKELALEKKEQSLADKSKHLNEREENVTQLEAEKQAELERIGQMTIAEAREVILTETEN
NLTHEIATRIKDAEAQIIDTVDKKAKNLLAQAMQRLSGDYVTEQTVTTVHLPDDNMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPVRREIARMTLEALIKDGRIHPARIE
ELVEKSRKEMDNRIREYGEEAAYEIGAMNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
LAGIMASELGENVALARRAGFLHDMGKAIDKEVEGSHVEIGTEFARKYKEHPVVVNAIAS
HHGDVEPESVIAVIVAAADALSSARPGARNESVENYVKRLRDLEEIASSFDGVQTSFALQ
AGREIRIMVHPNKISDDEVTILSHKIREQIEKNLDYPGNIKVTVIREFRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgataaacatgataattttagttgtctttgcactcattggtttagtcgttggatgttta
gcaatttctatcaaacttagcaaagctaaggaacaagcagaaactatcttgctaaaggca
gaacaagacgctgtgaatcttcgtagtcaggcagaacatgatgcagattatctacgtgta
actgctgaacgcgaaagtaaggctcaacgtaaagagctcttgttagaggcaaaagagaaa
gctagaaaatatcgagaagatattgaagaagaattcaaatctgaacgtcaagagcttaaa
caaatggagaatcgtttaacagaacgtgcaaccagccttgatcgtaaggatgaaaatcta
tcaagtaaagaactcgccctcgagaaaaaagagcagagtcttgctgacaaatctaaacat
cttaatgagcgtgaagagaatgtgactcagttggaggctgagaagcaagctgaacttgaa
cgtattggtcaaatgaccattgcagaggcgcgtgaggtaatcttaacagagactgaaaat
aatcttactcatgagattgcaacacgtatcaaagatgcagaagcacagatcatagatact
gttgataagaaggccaaaaacttgttggcgcaagctatgcaacgtttgtctggggattat
gttactgaacaaaccgtaaccactgttcacctcccagatgataatatgaaaggtcgtatc
attggccgtgaggggcgtaacattcgtacccttgaaagcttaacaggtattgatgttatc
atcgatgatactccagaagtggttgttctttctggttttgatccagtccgtcgtgagatt
gctcgcatgactctcgaagccttgattaaggatggacgtatccatccagctcgtattgag
gagttggttgagaaaagtcgtaaggaaatggataaccgtatccgcgaatatggtgaagag
gcagcttacgaaattggggctatgaatctccaccctgacctaatcaagattatgggacga
ttgcagttccgtacttcatatggtcaaaacgtacttcgtcactcagttgaagttggtaaa
ctagcaggtattatggccagtgaattgggtgagaatgtggctctagctcgtcgtgctggt
tttcttcatgatatggggaaagctattgacaaagaggtcgaaggtagtcacgttgagatt
ggtactgagtttgcacgtaagtataaagagcatccagtcgtggttaatgccattgccagc
caccatggagatgtggaacctgagagtgtgattgcagttattgtagctgcagcagatgct
ttgagttcggctcgcccaggagctcgtaatgaatccgttgagaattatgtcaaacgcctt
cgtgatttggaagagattgcatcaagctttgacggtgttcaaacaagcttcgcccttcaa
gctggtcgtgaaattcgtattatggttcatccaaataaaatctcagatgatgaagttacg
atcttgtctcacaagatacgtgaacaaattgagaaaaacttggattacccaggaaatatt
aaggttacagtcattcgtgaattccgtgcggttgactatgccaaataa
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