Streptococcus thermophilus JIM 8232: STH8232_1197
Help
Entry
STH8232_1197 CDS
T02026
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stu
Streptococcus thermophilus JIM 8232
Brite
KEGG Orthology (KO) [BR:
stu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stu03016
]
STH8232_1197 (truB)
Enzymes [BR:
stu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
STH8232_1197 (truB)
Transfer RNA biogenesis [BR:
stu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STH8232_1197 (truB)
Prokaryotic type
STH8232_1197 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF4537
Motif
Other DBs
NCBI-ProteinID:
CCC19892
LinkDB
All DBs
Position
998856..999737
Genome browser
AA seq
293 aa
AA seq
DB search
MISGIINLKKEAGMTSHDAVFKLRKILHEKKIGHGGTLDPDVTGVLPITVGKATRVIEYM
TEAGKVYEGEITIGFSTTTEDASGEVVQTTPITELDGATVDQAMASFEGEITQIPPMYSA
VKINGKKLYEYARAGEEVERPQRQVKITEFVRTSPIELENGTARFTFRVACSKGTYVRTL
SVDLGVKLGFASHMSALRRTASAGLTLDSSLTLSQISEMVEAGDQSFLLPIEFGVQDLPA
VQVTEDDAKEISFGRFISINSQEPLVAAFLGDKVLAIMEKRGQVYKPRKVLSQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaggaattattaatctaaaaaaagaggctggaatgaccagtcatgatgctgtt
tttaaactacgcaaaatattacatgagaaaaaaattgggcacggcggaactcttgatcca
gatgttactggtgttctacctataacagttggaaaagctactcgtgttattgaatacatg
actgaagcgggtaaagtctatgaaggcgaaatcactattggattttcgacaactaccgaa
gatgctagtggagaagtcgtccaaacaactccaataacagagctagatggagcaactgtc
gatcaggcgatggctagttttgagggagaaatcacacaaattcctcctatgtattcagcg
gttaagatcaacggaaagaaactttatgagtacgcccgagctggagaagaagttgaacgt
cctcaacgtcaggtaaaaattaccgagtttgtccgaacctcacctattgagctagaaaac
ggtactgcaagattcaccttccgtgttgcttgtagtaaaggaacttatgtccgcacctta
tctgttgatttgggtgtaaaactaggctttgctagtcatatgtctgctctgcgtcgaaca
gcttctgcaggtttaacattagattcatccctaactctgtcacaaatttctgaaatggta
gaagcaggagaccagtccttcctactccctattgaatttggcgttcaggacctgccagcc
gtacaagtcactgaagatgatgccaaagaaatctcatttggtcgctttatttcaattaat
agccaagagcctttggttgctgcctttttgggcgacaaagttctagctattatggaaaag
cgaggtcaagtctataaacctagaaaagtattaagtcaatga
DBGET
integrated database retrieval system
