Streptomyces tubercidicus: STRTU_003514
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Entry
STRTU_003514 CDS
T09099
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
stud
Streptomyces tubercidicus
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stud03021
]
STRTU_003514 (sigM)
Transcription machinery [BR:
stud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRTU_003514 (sigM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
Motif
Other DBs
NCBI-ProteinID:
WAU13070
LinkDB
All DBs
Position
4046886..4047569
Genome browser
AA seq
227 aa
AA seq
DB search
MGPLEASSDQDLIARHVDGDPEAFGEIVRRHRDRLWAVALRTLGDREEAADAVQDALVSA
YRAAHTFRGQSAVTTWLHRITVNACLDRARKAASRRTSPVAETERLEQLLEPEESAEAPA
ERQDLHRELLSALRTLPEEQRAALVLVDMQGYPVAEAASILDVPTGTVKSRCARGRARLL
PLVTHLRADNGDSNPVSGGRNRAQGTSVPPTAGPKDTGAVKGGGGRT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgggtccgctagaggcttctagtgatcaagacctcatcgctcgccatgtcgatggtgac
cccgaggcgttcggggagatcgtccggcggcaccgcgaccggctctgggcggtggccctg
cgcaccctcggtgatcgcgaggaagccgccgatgccgtgcaggacgccctggtctcggcc
tatcgcgccgcccataccttccgtggccagtccgccgtgaccacctggctgcaccgcatc
acggtcaatgcctgtctggaccgagcccgcaaagccgcttcccggcgcacctcgcccgtc
gccgagaccgaacgactggagcagctgctcgaacccgaggagtccgccgaagcgcccgcc
gagcgccaggatctgcaccgggagctgctcagcgccctgcgcacccttcccgaggaacag
cgtgccgcgctcgtcctcgtcgatatgcagggctaccccgtcgcggaggccgcgtcgatc
ctcgatgtcccgaccggaacggtgaaaagccgctgtgcacggggccgggcacggctcctc
cccttggtcacccatctgcgcgccgacaacggggatagcaatcccgtgagcgggggaagg
aaccgggcgcaggggacatccgtcccaccgacggcaggaccgaaggacacaggtgccgtg
aagggcggaggtgggcgaacgtga
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