Subtercola endophyticus: LQ955_01545
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Entry
LQ955_01545 CDS
T08409
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
suba
Subtercola endophyticus
Pathway
suba00190
Oxidative phosphorylation
suba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LQ955_01545
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQ955_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suba03019
]
LQ955_01545
Enzymes [BR:
suba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LQ955_01545
Messenger RNA biogenesis [BR:
suba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LQ955_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UFS59512
LinkDB
All DBs
Position
complement(294120..296300)
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AA seq
726 aa
AA seq
DB search
MDGDNITLDAGVGSDYLDDDFEIIEDPNDPALPEGRYLDRELSWLAFNRRVLELAEDPSI
PALERANFLAIFSSNLDEFFMVRVAGLKRRILTGLAVPTNVGRGPQEVLDDISLVVHELQ
ARHAAAYQDLVKPALDEAGIHIVTWDSLDQTEQDHLTEVFSDEIFPVLMPLAVDPAHPFP
YISGLSLNLSVRVRNPKSDRQEFARLKVPQVLPRFVRVNPKERSKDVRFISLEDLIANHL
LHLFPGMEVLEHHVFRVTRNEDVEIEEDETENLIQALEKELLKRRFGPPIRLEITEDMDD
VTLGLIVRELDVTEQEVYRLPAPLDLGGLFELSKIDRPDLKYPKHVPTTNVYLLPPEPNA
RPDIFKAIARQDILVHHPYESFATSVQAFLEQAAADPDVLAIKQTLYRTSGDSPIVEALI
AAAESGKQVLALVEIKARFDEQANITWARKLEKAGVHVVYGLVGLKTHCKLALVVRREKG
KLKHYSHIGTGNYNPKTSRIYEDFGLFTADDQVGKDLTRLFNELSGYAIEKKFKRLLVAP
LHLRKGLLKRIAQEAANAEAGLPSGIKIKLNSIVDEAIIDGLYRASQAGVPIDIWVRGIC
GIKPGVPGVSETIRVRSILGRYLEHSRIFSFANDGDPQIFIGSSDMMHRNLDRRVEALVR
LTSPEHLREISTLFDLAMSDAVTSWWLDSDGEWTRHTENEAGEKLIDLQDRLMYLTSRRK
RPGILR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacaacatcaccctcgacgctggcgtgggtagcgactatctcgacgacgac
ttcgagatcatcgaagaccccaacgacccagctctgcccgaaggccgttacctcgaccgc
gagctgagctggctcgccttcaaccggcgggtgctcgaactcgccgaagacccctcgatt
cccgcgctggaacgcgccaactttctcgccatcttctcgagcaacctcgacgagttcttc
atggttcgagtcgccggcctgaagcgtcgcattctcaccgggctcgccgttcccaccaac
gtgggtcgtgggccgcaggaggtgctcgacgacatctcgctcgtggtgcacgaactgcag
gcgcggcacgcggcggcctaccaagacctcgtgaagccggcgctcgatgaggcgggcatc
cacatcgtcacctgggactcgctcgaccagaccgagcaagaccacctcaccgaggtgttc
agcgacgagatctttccggtgctcatgccgctcgcggtcgaccccgcgcatccgttcccg
tatatctcgggcctgtcgctgaacctctcggtgcgcgtacgcaacccgaagtcagacagg
caggagttcgcgcgcctcaaggtgccgcaggtgctcccccgcttcgttcgggtgaacccg
aaagagcgcagcaaagacgtgcgcttcatcagcctcgaagacctcattgcgaaccacctg
ctgcacctttttccgggtatggaggtgctcgaacaccacgtctttcgcgtcacgcgcaac
gaagacgtcgagatcgaagaagacgagaccgagaatctcattcaagcgctcgaaaaagaa
ctgctgaagcgccggttcggcccgcccatccgtctcgagatcaccgaagacatggatgat
gtcaccctgggcctcatcgttcgtgaactcgatgtcaccgaacaagaggtgtaccggctg
ccggccccgctcgacctcggcggcctgttcgaactgagcaagatcgaccggcccgacctg
aagtaccccaagcacgtgccgaccacgaacgtctacctgcttccgcccgagcccaatgcg
cggccggacatcttcaaggcgatcgcccggcaagacattctcgtgcaccacccctacgag
agcttcgccaccagcgtgcaggcgtttctggagcaggccgccgcagaccccgacgtgctg
gccatcaagcagacgctctaccgcaccagcggtgacagccccatcgtcgaggcgctcatc
gcggccgccgaatcgggcaagcaggtgctggccctggtggagatcaaggcgcgcttcgac
gagcaggccaacatcacctgggcgcgcaagctcgagaaggccggcgtgcacgtcgtgtac
gggctcgtcgggctgaagacccactgcaagctcgccctcgtggttcgccgcgaaaagggc
aagctcaagcactacagccacatcggaacgggcaactacaacccgaagacctcgcgcatc
tacgaagacttcggcctgttcacggccgacgaccaggtgggcaaagacctcacccggctc
ttcaacgagctctcgggatacgccatcgagaagaagttcaagcgtcttctcgtggccccg
ctgcacttgcgcaagggcctgctcaagcgcatcgcgcaagaggcggcgaacgccgaggcc
gggctgccctctggcatcaagatcaagctgaactccatcgtcgacgaggccatcatcgac
ggcctctaccgggccagccaggccggcgtgccgatcgacatctgggtgcgcggcatctgc
ggcatcaagccgggcgtgcccggcgtcagcgaaacgattcgagtgcgctcgattctcggc
cggtacctcgagcactcgcgcatcttctcgtttgcgaacgacggcgacccgcagatcttc
atcggcagctccgacatgatgcaccgcaacctcgaccgtcgcgtcgaggccttggtgcgt
ttgacgagtcccgaacacctgcgggagatcagcaccctgttcgacctcgccatgtcagac
gcggtcacctcctggtggctcgacagcgacggcgagtggacccggcacaccgagaacgaa
gcgggagagaagctcatcgacctgcaagaccgcttgatgtacctcacgtctcgccgaaag
cgcccgggaattcttcgttga
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