Sulfuriferula sp. AH1: CAP31_05515
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Entry
CAP31_05515 CDS
T04857
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sulf
Sulfuriferula sp. AH1
Pathway
sulf03410
Base excision repair
sulf03430
Mismatch repair
sulf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sulf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAP31_05515
03430 Mismatch repair
CAP31_05515
03440 Homologous recombination
CAP31_05515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulf03400
]
CAP31_05515
DNA repair and recombination proteins [BR:
sulf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CAP31_05515
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CAP31_05515
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CAP31_05515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ARU31191
UniProt:
A0A1Y0G5Y9
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Position
1054578..1056272
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AA seq
564 aa
AA seq
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MSEANIVVREFPAEHAQQLSAAGVHPVLARIYAARGIQQADQLDTGLSGLLHFGTMKNIL
AMAARLADAVDRQQRILVVADYDADGATACTVAVRGLRLLGLTAEFLVPNRFEYGYGLTP
EIVQLAAQQHPDIIVTVDNGIASIAGVQAAQALGIEVLVTDHHLPGDSLPDALIVNPNQP
DCPFPSKHLAGVGVMFYVLLALRVELQARGAFADRVAPNLAVLLDIVALGTVADVVRLDD
NNRILVEQGLRRMRQGRACAGIRALFNAAARPIATATAADLGFMIGPRLNAAGRLEDMSL
GIACLLSEDDAAAEIMAQRLHALNAERRSIEADMQAQALASLEHITTTESYSLAMFDPDW
HQGVIGILASRLKDKFHRPVICFARGNNGEIKGSGRSIGPLHLRDALDIVSKRAPNLILK
FGGHAAAAGLSIRETDFAEFVSLFEQTVQGLLSPADLARTIPTDGSLAPNELNVELAQVI
HAQVWGQGFPAPSFDGEFRVAQQRILKDRHLKLQLESGGRRFDSILFNRTELLPAVIHAV
YQPELNHYNGQIRLQIKLEHWRRG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagccaatatcgtcgtgcgcgaattcccggctgaacatgcgcaacaactgagc
gctgccggcgtacatccggttctggccaggatatacgccgcacgcggcatacagcaggcc
gatcaactggataccgggttatcgggtctgctgcacttcgggacgatgaagaacattctc
gcaatggcggcgcggctggccgatgcggtcgatcgtcagcagcgcattctggtcgttgcc
gattacgatgcggatggcgcgaccgcgtgtaccgtcgcggtgcgcgggttgcgtctgctg
gggctgacggcggagtttctggtgccgaaccggtttgaatacggttatggcctgactccc
gagatcgttcagctcgcagcacagcagcatcctgacatcatcgttaccgtggataacggc
atcgccagcattgccggcgtacaggcagcgcaggcgctgggtatcgaggtgctggtcacc
gaccaccacctgcccggcgacagcttgcctgacgcgttgatcgtcaatcccaatcagccg
gattgcccgttccccagcaagcatctggccggcgtcggagtcatgttttatgtattgctg
gcgctgcgcgttgaattgcaggcgcgcggtgcgttcgccgatcgagtagcgccgaatctg
gccgttttgctcgatatcgtagcactggggacggtcgccgacgtggtcaggctggatgac
aataaccgcattctggtcgaacagggtttgcgccgtatgcgtcagggacgtgcctgtgcc
ggcatccgggcattattcaatgcggctgcccggcctatcgccaccgccactgccgccgat
ctgggcttcatgatcgggccgcggctgaacgccgccggacgtctggaagacatgtcgctg
ggcattgcctgcttgttgagcgaggacgatgctgctgccgaaatcatggcgcaacgcctg
catgccctcaatgccgaacgtcgcagcatagaagccgatatgcaagcgcaagccctggcc
agcctggagcatatcaccactaccgagagttacagtctggccatgttcgacccggattgg
caccagggcgtcattggcatcctcgcgtcgcggctcaaggacaaattccatcggccggtg
atctgctttgcccgcggcaataacggcgaaatcaaaggctctggccgttccatcggaccg
ttgcatctgcgcgatgcgctggatatcgtctccaagcgggcgccgaatctgattttgaaa
tttggcggacacgccgctgctgcgggtttgtccatccgcgagacggatttcgccgagttc
gtcagtctgttcgagcagacggtgcaaggcctgttaagcccggctgatctggcacggacg
attcctaccgatggcagtctggcgccgaatgaactcaatgttgaacttgcgcaggtgatt
catgcgcaagtgtggggccaggggttccctgctcccagttttgatggcgaattccgggtc
gcgcagcagcgtatcctcaaagacaggcatctgaaattgcagctggaaagcggggggcga
cgctttgacagcatcctgtttaatcgcacggagttgctgcctgcagttatccatgcggtt
tatcagcctgagctgaatcattacaacggtcagatccggttgcagatcaagcttgagcat
tggcggcgtggatga
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