Sulfurimonas lithotrophica: FJR48_05240
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Entry
FJR48_05240 CDS
T06298
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sulg
Sulfurimonas lithotrophica
Pathway
sulg03030
DNA replication
sulg03430
Mismatch repair
sulg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sulg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJR48_05240 (dnaE)
03430 Mismatch repair
FJR48_05240 (dnaE)
03440 Homologous recombination
FJR48_05240 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulg03032
]
FJR48_05240 (dnaE)
03400 DNA repair and recombination proteins [BR:
sulg03400
]
FJR48_05240 (dnaE)
Enzymes [BR:
sulg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJR48_05240 (dnaE)
DNA replication proteins [BR:
sulg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FJR48_05240 (dnaE)
DNA repair and recombination proteins [BR:
sulg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FJR48_05240 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
FokI_D3
Motif
Other DBs
NCBI-ProteinID:
QFR49161
UniProt:
A0A5P8P0N4
LinkDB
All DBs
Position
1038839..1042387
Genome browser
AA seq
1182 aa
AA seq
DB search
MSAQPFTHLHLHTEYSLLDGANKLTNLVKQVKELGMTSVAMTDHGNMFGAIDFYHQMKEA
GIKPIIGMEGYIHNGETLDDKSTKQRFHICLFAKNKKGYENLMYLSSKAFIEGMYYFPRI
NKNELREHSEGIICSSACLQGEVNWHLNTANERNVKNGALGYAGALEVAREYKDIFGDDF
YLEIMRHGIGDQLFIDEQILKISKELDIKVVATNDTHYTYPGDAQYHEAFMCIGMNKLYD
DPNRLRHSVHEFYLKSPAQMQRLFADIPEALIHTQEIVDKCEDFVPVVKTPTPPNFKFTP
EYAQKDGFALSCDEPNTMDAEYFVFCCKKGLEERLKHVPQDRHQEYKERLEFEMDIINSM
KFPGYMLIVWDFVRVAKEMGIAVGPGRGSAAGSLVAYALEITDIDPMKYDLLFERFLNPE
RVSMPDIDMDFMQARRGEVIDYVVEKYGRNQVAQIITFGSLLAKGVIRDVARVLDMPLSQ
ADKMAKLIPDELGITLNGKEKKGEFIPGAFQKEPKLQELVETDTNAARVWEFAKKLEGLK
RNSGIHAAGVVISNEELWKKTPIYKPSGEDTFVTQYSLNYLEDVDLIKFDFLGLKTLDVI
DNAIKLIKLRYDKDIDWHKIDENDPKVYEVIRGGNTVGMFQIESDGMQDLNKRLKPDSFE
DLIAVLALYRPGPMESGMLDSFIERKHGREAIEYTFDAMEPILNNTYGVIVYQEQVMQIV
QTIGGFSLGYSDIIRRAMGKKKDMAVYNAEFSEGAQKQGLDYDKASQLFDLIEKFAGYGF
NKSHSAAYAMVTFQTAWLKTYYPNEFMAALLTSDKDNTDKVVRYIDEVKRMGIELSPPDI
CDSQLEFSAINKDGQEIILFGLGAIKGVGGAAIESMLKERKENGDYKSLEDFVNRIEPSK
VNKRVIESAIKAGAFDRYGYSRKALLDQIELIVETAKSASEAKKNAAGSLFGDDAEITTV
KLELSNSEEYGLKSILEFEKNTLGFYVSGHPLDDFREKIEQLNYTLSSEIADAKDGSYVI
FIGKVEDVEKKISKKGNQFGIVDLMDFHGNIDIMLFEDKLNELEEMDLDEPIAFKAKITH
TDMFTRIGVTKIMTLKEATKETKKVKKEVREIPQEPLNLAVKISDDSKILDELYTLVRQN
PGSRELKLTIVSKLQNIVIESGIRVNNNIIKAIDGNELIDIL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcaaccttttactcacttacatttacatacggaatactcactcttagacggt
gcaaataaacttacaaatctagttaaacaggttaaagagcttggtatgacaagtgtagct
atgacggaccacggtaatatgttcggtgcaattgatttttaccaccagatgaaagaagcc
ggtataaaaccgattattggaatggaaggttatatacataacggtgaaacattagatgac
aaatctacaaaacaaaggtttcatatatgtttgtttgccaaaaataaaaaaggctatgaa
aatctaatgtatttgtcttctaaagcatttatagaaggtatgtactattttcctcgtata
aacaaaaatgagttacgtgagcattctgagggtattatatgttctagtgcttgtcttcaa
ggtgaagttaactggcatctaaatacggcaaatgaacgtaacgtaaaaaacggagcattg
ggatacgccggtgctttagaagtcgctcgtgaatataaagatatattcggagatgatttt
tatttggagattatgcgtcacggaataggcgatcagctttttattgacgagcagattcta
aaaatatctaaagagttggatataaaagtggtagctacaaacgatacccactatacatat
ccgggtgatgcacagtatcatgaagcttttatgtgtatcggaatgaataaactctacgat
gatccaaaccgtcttcgccattccgttcatgagttttacttaaaatcacctgcacagatg
cagagactttttgcagatattccagaagcattgatacatactcaagagatagtagataaa
tgtgaagattttgtaccggttgtaaaaacaccgacacctccaaactttaaatttacaccc
gaatatgcgcaaaaagacggttttgcattaagttgtgatgagccaaatactatggatgca
gagtattttgtattttgttgtaaaaaagggcttgaagagcgtttaaaacatgtaccacag
gatagacaccaagagtataaagaacgtctagaatttgaaatggatattatcaactctatg
aaatttccgggatatatgcttatagtttgggattttgttagagtagccaaagagatgggt
atagcggttggtcccggacgcggatctgccgcgggaagtcttgttgcatatgcactggaa
attacagatatcgatcctatgaagtatgatttgctttttgagagatttttaaatcccgaa
cgtgtatcgatgcccgatatcgatatggactttatgcaggcacgccgtggtgaagtaatt
gattatgttgtagaaaaatacggtcgtaatcaagttgctcagattattacctttggttca
cttcttgccaaaggggttatacgtgatgttgcacgcgtgcttgatatgcctctaagtcaa
gcagacaaaatggcaaaacttatacctgatgagcttggtattacgctaaacggtaaagaa
aaaaaaggtgagtttataccgggggcttttcaaaaagagcctaaacttcaagaacttgtt
gaaacagacacaaatgcagcaagggtttgggagtttgcaaaaaaactcgaagggcttaaa
agaaactcaggtattcatgccgcaggtgtagttataagcaatgaagagttatggaaaaag
acaccaatatacaaaccttcgggtgaagatacttttgtgacgcaatactcgctaaactat
cttgaagatgttgatttaattaagtttgacttcttgggtcttaaaactcttgatgtaatc
gataatgctataaaacttataaagctcagatacgataaggatatagattggcataaaatc
gatgagaatgaccctaaggtttatgaagttattcgcggcggaaatacggttgggatgttt
cagatagaatcagacggtatgcaggatttaaataaacgtcttaaacctgatagttttgaa
gacttgattgcggtcttggcactttatagaccgggaccgatggaatcagggatgcttgat
agctttatagagcgtaagcacggacgtgaagcgatagaatatacttttgatgcgatggag
cctatactaaacaatacatacggggtcatcgtttatcaagaacaggttatgcagatagtt
cagactatcggtggttttagtttgggttattcagatattatccgtcgtgcaatgggtaag
aaaaaagatatggcggtatataacgccgagtttagtgaaggtgcacaaaagcaggggctt
gattacgacaaagcatctcagctgtttgatttgattgaaaagtttgcgggttacggtttt
aacaagtctcactctgcggcatatgcaatggttacatttcaaactgcttggctaaaaacg
tattatccaaacgaatttatggcagcacttcttacaagcgataaggacaataccgataaa
gtcgtcagatatatcgatgaagtcaaaagaatgggaatcgaactctcgcctccggatatc
tgtgattcgcaactagagttttctgctataaataaagacggacaggagataatccttttt
ggacttggagctattaaaggtgttggtggagctgcgatagaatcaatgctaaaagaaaga
aaagaaaatggcgattataagtctttagaagattttgtaaatagaattgaaccttcaaaa
gtaaataaacgtgtgattgaatcggctataaaggcaggagcgtttgacaggtacgggtat
tcccgaaaggcattgcttgaccagattgagcttatagttgagactgcaaaaagtgcaagt
gaagccaaaaaaaatgcggctgggagcttgtttggagatgatgcagaaatcactaccgta
aaacttgaacttagcaactctgaagagtatggtttaaaatcaatcttggaatttgaaaaa
aataccttaggattttatgtatctgggcatcctttggacgactttagagaaaaaatagaa
caactaaactatacactctcatcagagatagcagatgccaaagacggttcatatgttata
tttataggtaaagttgaagatgtagagaaaaaaatatctaaaaagggaaatcagttcggt
atcgtagatttgatggattttcacggaaatatagatattatgctttttgaagataaactc
aacgaacttgaagagatggatctggatgaacctatagcttttaaagcaaaaattacccat
acggatatgtttacccgcataggtgttacaaaaatcatgactctaaaagaagcaaccaaa
gagacaaaaaaagttaaaaaagaggtgcgtgagattccgcaagagcctttaaatttagcc
gttaagataagtgatgattcaaaaattctggatgaactttataccttagtcagacaaaat
cccggaagtagggagttaaaattgactatcgtatcgaaattacaaaatatcgttatagaa
tccggcataagggtaaacaacaatattataaaagctatagacggaaatgaacttattgat
attttgtaa
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