Sulfurimonas xiamenensis: FJR47_07880
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Entry
FJR47_07880 CDS
T06240
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
suln
Sulfurimonas xiamenensis
Brite
KEGG Orthology (KO) [BR:
suln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
suln03009
]
FJR47_07880 (rimO)
Enzymes [BR:
suln01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FJR47_07880 (rimO)
Ribosome biogenesis [BR:
suln03009
]
Prokaryotic type
ribosomal protein modification factors
FJR47_07880 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
SQAPI
ITPK1_preATP-grasp
Cauli_DNA-bind
Motif
Other DBs
NCBI-ProteinID:
QFR43835
UniProt:
A0A5P8NPA5
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All DBs
Position
1559860..1561173
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AA seq
437 aa
AA seq
DB search
MGNKLHIVSLGCTKNLVDTEVMIGKLQNFILTDKQEEADVIIVNTCGFIDAAKEESINTV
LNLHESRKEDSVLVMAGCLSERYKEELAKEMPEVDIFTGVGDYDKIDELLQEKKSRFSDE
VFLIDGAERVVTGSSYHAYIKLSEGCNQTCSFCAIPSFKGKLHSRNLDSIAKEVEGLVAK
GYWDFSFVSQDSSSFLRDQNVKDGLSLLIDRIELIEGVKSARILYLYPSTTTLTLLKNIA
KSKIFHNYFDMPIQHINDAMLKIMKRGFGKSQTLELLEYMKSLPDSFLRTSFIVGHPKET
EEMFDEMCEFAASFGFDRINVFAYSDEETTSSHEMSEKIPAKIINKRAQKLGKIASESLE
KSLKNEIGKETLIVIDTQSEEHEYLLSARKLIWAPEIDGEIYVNDKTGDEELEFGKIYKA
TITDKVGSILTATVDNA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgggcaataaacttcatatagtatctttaggatgcacaaaaaatcttgtcgacacagaa
gtaatgatagggaaacttcaaaattttatcctaacagacaaacaagaagaagcggatgta
attatcgtcaatacatgcggctttatagatgctgcaaaagaggagtcaataaatactgtt
ttaaatcttcatgaaagcagaaaagaggactctgttttggttatggcaggctgtttgagt
gagagatacaaagaggagcttgcaaaagagatgcctgaggttgatatctttaccggagta
ggcgactatgacaaaatcgatgaacttttacaggaaaaaaagagccgtttttcagatgaa
gtatttttaatagacggtgccgagcgtgtggtgacaggttcatcataccacgcctacatc
aaactctcagaagggtgcaaccaaacatgcagcttctgcgccattccttcattcaaagga
aagttacactcaagaaatttagattctattgctaaagaggttgagggtttagtggcaaaa
ggttactgggatttctcctttgtatcgcaagactccagttcgtttttgcgggatcaaaat
gtaaaagatgggcttagtctgcttatcgatagaattgagcttattgagggagtaaagagt
gcaagaattctttatctctacccctcaacaacaacgctgacactcttaaaaaatatagcc
aaaagcaaaatatttcacaactatttcgatatgcctatccagcacataaatgatgcaatg
ctcaaaattatgaaacgaggttttggaaaaagtcaaacacttgaacttttagagtacatg
aaatcacttcctgattcatttttacgcacaagcttcattgtaggacaccctaaagagaca
gaggagatgtttgatgagatgtgtgagtttgccgctagcttcggctttgaccgcataaat
gtctttgcatattctgatgaagagacaacatcatcacatgagatgagcgaaaaaattccg
gcaaaaattatcaacaaaagagcacaaaaactcggtaaaatagcctctgaatctttagaa
aaatctctaaaaaacgaaattggaaaagagactcttatcgttattgacactcaaagcgaa
gaacatgagtatctgcttagtgcaagaaaacttatctgggcgcctgagattgacggtgag
atttatgtaaacgacaaaaccggtgatgaagagctggaatttggcaaaatttacaaagcg
acaatcactgacaaagtgggaagtatcttaacagcgactgtggacaatgcttga
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