Candidatus Sulfuricurvum sp. RIFRC-1: B649_04785
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Entry
B649_04785 CDS
T02537
Name
(GenBank) hypothetical protein
KO
K03701
excinuclease ABC subunit A
Organism
sulr
Candidatus Sulfuricurvum sp. RIFRC-1
Pathway
sulr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sulr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B649_04785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulr03400
]
B649_04785
DNA repair and recombination proteins [BR:
sulr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B649_04785
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B649_04785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
nSTAND3
AAA_22
AAA_25
AAA_33
DnaJ_CXXCXGXG
Viral_helicase1
RNA12
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AFV97271
UniProt:
K7SLK7
LinkDB
All DBs
Position
932636..935452
Genome browser
AA seq
938 aa
AA seq
DB search
MDKIKIIGAREHNLKNISLEIPKNKLIVCTGISGSGKSTLAFDTLYAEGQRRYIESLSSY
ARQFLDRVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARIGIQHC
HLCGKKISKMSAQDIIDQVLKLPDGAKIVILAPLVREKKGSFADILESLRHKGYVRAMVD
GVMVRLDEEIELSKTKKHTLKVVIDRLIIKDDNHDRVAQDVEKALKESYGEVEIEIQNHD
EVGMSEKLIHYSEHSACFDCKVSFDPLEPLSFSFNSPKGACSECDGLGIRYALDYDKIID
SELPIEKGAIKIVYGFNKGYYFTFLKAFCTASGISITAPFYTLEEYQKKAILHGSVDEVE
FKWQDHPIKRTWPGIVRIAYDIFKDEKDLADYMSEKPCNICNSHRLKRESLAVRVADKGI
GDVISMPLKDSYAWFADPQTFENLSDQSSMIASSILNEIRERLFFLYDVGLGYLSLSRDA
RTISGGEAQRIRIASQIGSGLTGVMYVLDEPSIGLHERDTLKLIRTLRSLQEKGNTVIVV
EHDKETIENADYIVDIGPGAGKFGGNVVFAGTLEEMKKSDTLTAQYLSGRKKIEYFYRRE
QKEWMSINNVTLNNITDLSVKIPLHNFVCVTGVSGSGKSSLILQTLLPVTREILNHARKI
NRVAGVEVEGLEKLDKVIYLDQSPIGRTPRSNPATYTGVMDEIRNLFAKTKEAQIRGYTA
SRFSFNVKGGRCEKCQGEGEIKIEMHFLPDIMVKCDSCHGSRYNLQTLQVEYKGKTISDV
LNMSVGEALEFFAPIPKIKAILQTLSDVGLDYITLGQNAVTLSGGEAQRIKLAKELSRRD
TGNTLYILDEPTTGLHFDDVNRLTKVLHNFVELGNSVLVIEHNLDMIKNADYIIDMGPEG
GSGGGLLVAQGDPECVARDWEKTGSFTGKYLALELNRL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggataaaataaaaattattggtgcacgagaacacaatctcaaaaacatttcattggaa
attccaaaaaataaactgatcgtatgtaccggaatcagcggaagcggaaaatcgacgtta
gcgtttgataccctttatgctgaagggcaacgtcgttacatcgaatcactctcttcgtac
gcacggcagtttttggatcgtgtcggcaaaccggatgtggataaaatcgaagggcttacc
ccagccatcgcaatcgatcagaaaaccacctccaaaaatccccgctcaacggtagggacg
atcaccgaaatctatgactatctccgccttttgtatgcccgtattggaattcagcactgt
catctctgcggtaaaaaaatctctaaaatgtcggctcaggatattatcgatcaggtattg
aaactccctgatggggcaaaaatcgttattttggcaccgctcgttcgggagaaaaaaggt
tccttcgccgatattcttgaatcgcttcggcacaagggatacgttcgtgcgatggtggat
ggggtcatggtacgccttgatgaggagatcgaactctcaaaaaccaaaaagcatactctt
aaagtggtgattgaccgtctgatcatcaaagatgacaaccatgatcgtgtggctcaagac
gtcgaaaaagcgctcaaagagtcctatggcgaggtagagatcgaaatccaaaaccatgat
gaagtagggatgagcgaaaaactaattcactacagtgagcatagtgcctgttttgactgt
aaagtgagttttgatccgctcgaacccctctcgttttcgtttaactctcccaaaggggcc
tgcagcgagtgtgatggtctgggaatccgatatgccctcgattatgacaaaatcatcgac
tctgaacttcccatcgagaaaggggcgatcaaaatcgtatacgggtttaacaaggggtat
tactttaccttcctaaaagcgttttgtaccgcatcggggatcagtatcaccgcaccgttt
tacacccttgaagagtatcaaaagaaagcgattctccacggcagtgtcgatgaagtagaa
tttaaatggcaagatcaccctattaaacgcacgtggccggggatcgttagaatcgcatac
gatattttcaaagatgaaaaagatctcgccgattatatgtctgaaaaaccgtgtaatatt
tgtaactctcaccggctcaagcgggaatcattggcggtacgcgttgccgataaagggatc
ggtgacgtgatctctatgccgcttaaagattcgtacgcatggtttgccgatcctcagacc
tttgaaaatctgagcgatcaaagttcgatgattgcctcttcaattttgaatgaaattcgt
gaacgtcttttcttcctctatgatgtggggttggggtacctttccctcagccgtgatgct
cgtaccatcagtgggggtgaagcacagcgtatccgtattgcttcacagatcgggagcggt
ttgacgggggtgatgtatgtcctcgatgagccgagtatcgggttgcatgagcgtgatacc
ctaaaactgatccgtactcttcgatctttgcaggagaaagggaatacggttattgtcgtt
gaacacgacaaagagacgattgagaatgctgactatatcgtggacatcggaccgggtgcg
gggaaattcggcggtaatgtcgtttttgccggaaccctcgaagagatgaaaaaaagcgat
accctcaccgcacagtatctttccggtcggaaaaagatcgagtatttttaccgtagagag
caaaaagagtggatgtcgattaacaatgtcacccttaataatattaccgatttaagcgtc
aaaattcctctgcataattttgtttgtgttacgggagtgagtgggagcgggaaaagttcg
ctgattttacaaacgcttcttccggttactcgtgagattctcaaccatgcccgaaaaatc
aaccgcgttgcaggggtcgaagtggaggggttggagaaactcgataaagtgatttatctc
gatcaaagtcctatcgggcgtacaccgcgttccaatccggccacctataccggggtgatg
gatgagattcgtaacctttttgctaaaaccaaagaggcacagattcgtggatatacggcg
tcacgctttagtttcaatgtcaagggcgggcgatgtgagaagtgtcagggggaaggggag
atcaagatcgagatgcactttttacctgacattatggtcaaatgtgattcatgtcacggc
agccgctataacctccaaacgcttcaagtggagtacaaagggaaaacgatttcggatgtt
ctcaacatgagtgttggggaagcgttggaattttttgctccgatcccgaagatcaaagca
attttgcaaacgttgagcgatgtgggattggactatattactctaggacaaaatgcggtt
accctctccggcggggaagcacaacggatcaaactggccaaagagttgagccgccgcgat
acggggaatactctttatatcctcgatgagccgacgacaggattgcatttcgatgatgtc
aaccgcctcacgaaggtcctccataatttcgtggaattggggaactcggtactcgttatc
gaacataatctcgatatgattaaaaatgccgactatatcattgatatgggacccgaaggg
ggaagcggaggcggattgctcgtcgcacagggtgatcctgaatgtgttgctcgagattgg
gaaaaaaccggaagttttaccggaaaatatttggctcttgagctaaataggctataa
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