Superficieibacter sp. HKU1: P0H77_13625
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Entry
P0H77_13625 CDS
T08896
Symbol
dacD
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe00550
Peptidoglycan biosynthesis
supe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P0H77_13625 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
supe01002
]
P0H77_13625 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
supe01011
]
P0H77_13625 (dacD)
Enzymes [BR:
supe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
P0H77_13625 (dacD)
Peptidases and inhibitors [BR:
supe01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
P0H77_13625 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
supe01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
P0H77_13625 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WES66691
LinkDB
All DBs
Position
complement(2818369..2819541)
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AA seq
390 aa
AA seq
DB search
MLLKRRLFIAVSLLASGISSALADDTFAVSPQPPAVQAGAWVLMDYTTGQILTAGNEHQQ
RNPASLTKLMTGYVIDRAIDSHRIRADDVVTVGKDAWAKGNPVFDGSSLMFLKPGDRLTV
HDLSRGLIVDSGNDACVALADYVAGGQPQFVKMMNSYVQKLNLRDTHFETVHGLDAPGQH
SSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTLKIDGLKTGHTSG
AGFNLIASAVEGNQRLIAVIMGAASAKGREDEARKLLVWGQQNYATVQILTKGKSIGNER
VWYGDKENVAVGPDRDFWMALPKTEIEHIKARYVLNGKELDAPIAAHQSVGEIELYDRDK
VVARLPLTTLNSVEKGGLFSRLSDYLHHKS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgaaacgccgtctgtttattgctgtttctttactcgcttcagggatttcttcc
gcgctggctgacgatacctttgccgtctcgccgcagccgcctgccgtccaggcgggagcc
tgggtgctgatggattataccaccggtcaaattctgaccgccgggaacgaacatcagcag
cgcaaccccgccagcctgaccaaactgatgaccggttatgttattgaccgggctattgat
agtcaccgtattcgtgcagatgacgttgtaaccgttggcaaagacgcgtgggcgaaaggg
aatccggtgtttgacggctcgtcgctgatgtttcttaaacccggcgatcgcttaacggta
cacgatttgagccgggggctgattgtcgattcaggtaacgatgcctgcgtggcgctggcg
gattatgttgccggcggccagccgcagtttgtgaagatgatgaacagctatgttcagaag
cttaacctgcgcgatacccatttcgaaaccgtccacggccttgatgcgccggggcagcac
agttcggcttacgatctggcggtgctttcccgcgccattattcacggcgagccggagttt
tatcacatgtacagtgagaaaagcctgacgtggaacggtattacccaacagaaccgtaac
ggcctgttatgggataagacactgaaaatcgacggtctgaaaaccggtcacacgtcggga
gccgggtttaacctgatcgcctctgccgtagagggaaatcagcggctgatcgcagtgatt
atgggcgcagccagtgccaaaggccgcgaagatgaagcgcgcaagctgctggtctggggc
cagcagaactatgccaccgtgcagatcctgacgaaggggaaatccattggcaacgagcgc
gtctggtatggtgataaagaaaatgtcgccgttggcccggaccgtgatttctggatggcg
ctgccgaaaacggaaatcgaacatattaaggcccggtacgtgctgaacggcaaagagctg
gatgcgccgattgccgctcatcaatctgtcggtgaaatcgaactctacgatcgcgataag
gtcgtcgcccggctgccgcttaccaccctgaacagcgtggaaaaaggcggtctgttctcg
cgcctgagcgattatctgcatcacaaatcctga
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