Candidatus Solibacter usitatus: Acid_2430
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Entry
Acid_2430 CDS
T00412
Name
(GenBank) putative RNA polymerase, sigma-24 subunit, ECF subfamily
Organism
sus
Candidatus Solibacter usitatus
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Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR_2
Motif
Other DBs
NCBI-ProteinID:
ABJ83419
UniProt:
Q025A7
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Position
3093683..3094891
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AA seq
402 aa
AA seq
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MSAPEELVEHLFRHQAGRMVSTLTRILGPRNLQLAEDVVQEALIRALELWPHRGIPANPA
AWLIEVARNRALDVLRREASLAAKADELTRVFSAAIAGAEGMDDQLAMIFLCAHPAIPHE
ARVALTLKTVCGFSTSEIARAFLIQEPAAAQRIVRAKRLVRDLNFALPEDGELAARRESV
LEVLYLMFNEGYTRNAVDLCEEAIRLGILVADHPATHAPEVDALLALFLLLSARTPARID
HRGDLFLLADQDRRLWNGERISDGMRRLDRSAAGYRVSTYHLEAAIAAAHATASDFASTD
WCFIVDQYDQLFALNPSPVIALNRAVAISRAEGAAAGLRALAVIEHHPALASYYLLHATR
ARLHEELGNHPSAALSYGRALECGCSPAERRFLERQATEPRP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcctgaagaactggtggagcatctcttccgccaccaggcgggccgcatggtc
tccactctgacgcgcatcctcggaccgcgcaacctgcaacttgccgaagacgtagtgcag
gaggcgctgatccgcgcgctggagctttggccgcatcgcggcatacccgctaatccggcg
gcgtggctcatcgaggtcgcgcgcaatcgcgctctcgatgtgcttcgccgcgaggcgtcg
ctcgccgccaaagcggacgaattgacgcgagtcttttcggccgccatcgccggcgccgag
gggatggacgatcagctcgcaatgatctttctctgcgctcatccggccatcccgcacgag
gcccgcgtcgcgctcacgctcaagactgtctgcggcttcagcacgtccgaaatcgcccgc
gcgtttctgattcaggaaccggccgccgcgcagcgcatcgtccgcgccaaacgcctggtg
cgcgacctgaatttcgcgctgccggaggacggcgagcttgccgcgcgccgtgaaagcgtg
ctcgaagtcctctacctgatgttcaacgagggctacactcgcaatgccgtcgacctctgc
gaagaggccattcgtctcggcattctggtggccgatcatcccgcgacgcacgcgcccgaa
gtggacgcgctgctcgccctcttcctgctgctatcggcgcgcacccccgcccgcatcgat
catcgtggcgatctcttcctgcttgccgatcaggaccgcaggctttggaatggcgagcgc
atttccgacggcatgcgccggctcgatcgcagcgcggccggctaccgcgtcagcacgtat
catctggaggctgcgatcgccgccgcgcacgccacggcgtccgatttcgcgtccaccgat
tggtgtttcatcgtggatcaatatgaccagctcttcgcgctcaatccttcgcccgtgatc
gcgctcaatcgcgcggtcgcgatctcacgcgccgagggcgcggccgccgggttgcgcgcg
ctcgcggtcatcgagcatcatcccgcgctggccagctactacctgctccacgccacccgg
gcgcggctccacgaagaactcggtaatcatccgtccgccgccctcagttacgggcgtgcc
ctggaatgcggatgctcccccgcggaacgccgctttctcgaacgccaggcaacggagcct
cgaccgtaa
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