Sutterella faecalis: FG381_02480
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Entry
FG381_02480 CDS
T06027
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sutk
Sutterella faecalis
Brite
KEGG Orthology (KO) [BR:
sutk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sutk03016
]
FG381_02480
Enzymes [BR:
sutk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
FG381_02480
Transfer RNA biogenesis [BR:
sutk03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
FG381_02480
Prokaryotic type
tRNA splicing ligases
FG381_02480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QDA53906
UniProt:
A0A5B7ZHL8
LinkDB
All DBs
Position
628583..629767
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AA seq
394 aa
AA seq
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MIPECFSGCFLHVMTYFDIEGACAVARYYAPSSAAAPEPALRGQAEWLASRESSRNQKIR
LMPDAHPGKIGPIGLAMTVGDSLLPGLVGIDMGCGVTLAKLRMKRRPDFGALSAFAREQI
PSGFAVREKPLPEALRFNFERFRVLRHINLEGAQKSLGTLGGGNHFLEIDRDQEGAFWLV
VHSGSRRLGVEVAGRYMQLASAQAAGTPDGKVPFEEAPLSGGLLTDYLLDLEGASSYAEA
SRRAMLRLICDGMRWKMESLLSIVHNYVDCSGTVPILRKGAISAKAGEPVAIPINMRDGI
LLGVGLGNAEWNESAPHGAGRILRRDAVKSVLTVRQLRDEMKAAGIQSPSISAETLDEAP
EAYRALADILPALAPTVRVSARLKPVWCFKGGKG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgagtgtttttcaggatgttttcttcacgtcatgacttatttcgacattgag
ggcgcctgcgcggtcgcgcgatactatgcgccttcgtccgctgccgcgccggaacccgcg
ctccgcggccaggcggaatggctcgcgtcgcgcgaatcgagccggaaccagaaaatccgc
ctgatgccagacgcccacccgggaaaaatcggcccgatcggcctcgcgatgaccgtgggc
gatagcctcctcccgggcctcgtcgggatcgacatgggctgcggcgtcacgctcgcaaag
ctccgcatgaagcggcgcccggatttcggcgccttgtccgcttttgcgcgggagcagata
ccctcgggctttgcggttcgagagaagcccctcccggaggccctccgcttcaatttcgag
cgcttcagagtgctccgacacatcaatcttgagggcgcacagaagtcgcttgggaccctc
ggcggcgggaaccattttctcgaaatcgaccgggatcaagaaggcgccttctggctggtt
gttcattccggaagccggcgcctcggcgtcgaggtcgccggccgctacatgcagctcgcg
agcgctcaggcggcagggactccggacggaaaagtgcctttcgaagaggctccgctttcg
ggcgggctcctcaccgactacctcctggacctcgagggcgcctcttcgtacgcggaagca
agccgccgggcaatgctccgcctcatctgcgacggcatgcgctggaagatggaatcactt
ttgtcaatcgtgcacaactatgtcgactgttccggcacggtgccgattctgagaaaaggc
gcgatctcggccaaggcgggcgaacccgtcgcaataccgatcaacatgcgggacggcatt
ctcctcggcgttggtctgggaaacgccgaatggaacgaatccgcgccgcacggcgccggc
cggattctgagacgcgacgctgtgaagagcgtccttaccgtcaggcaattgcgcgacgaa
atgaaggcggcaggcattcaatcgccctcgatcagcgcggaaacgcttgacgaagccccc
gaagcctaccgggcgctcgccgacattctccctgccctcgctccaaccgtccgggtgtcg
gcaaggctcaagcccgtctggtgcttcaaaggcggaaaaggctga
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