Stella vacuolata: STVA_53280
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Entry
STVA_53280 CDS
T06335
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
svc
Stella vacuolata
Pathway
svc03030
DNA replication
svc03430
Mismatch repair
svc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STVA_53280 (holA)
03430 Mismatch repair
STVA_53280 (holA)
03440 Homologous recombination
STVA_53280 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svc03032
]
STVA_53280 (holA)
03400 DNA repair and recombination proteins [BR:
svc03400
]
STVA_53280 (holA)
Enzymes [BR:
svc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STVA_53280 (holA)
DNA replication proteins [BR:
svc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STVA_53280 (holA)
DNA repair and recombination proteins [BR:
svc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STVA_53280 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
BBK45308
LinkDB
All DBs
Position
complement(5630701..5631729)
Genome browser
AA seq
342 aa
AA seq
DB search
MKIPGARLDAFCKRPDAGVRAVLVYGPDAGLVRERADLLGRSVLPDLDDPFRVSMLTGAA
IVADPPRLAEETAAQSLVGGRRLVRVRDAGDATAPAFDRVLKDKAAGDTLVVAEAGELRA
GSPLRKLFETAAAAAAVPCYVDEGAALERILRETLSRFRVNLDGDAAHWLAAHLGGDRGV
LRGEAEKLALYVGDGGRVTVEDCIAVVGDSAEIALDAVVTATAGGDRQRLERLLDRVFAE
GEQPIRVLRSLQRHYLRLLGLAAAVEAGSSPQAAVDALRPKPHFKEAPHLAAQAQRWSRR
RVAYALSRLADAEADCKRSSFPPELVCRRALDDLSRVAAPRR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccctggcgcccggctcgatgccttctgcaagcggcccgatgccggagtgcga
gcagtactcgtttacgggcccgacgccgggctggtgcgggaacgggccgacctgctgggc
cgcagcgtcctgcccgatctcgacgacccgttccgcgtctcgatgctgaccggggctgcc
atcgtcgccgatccgccgcgcctcgccgaagagacggctgcccagtccctggtcggcggc
cgccgcctggtgcgcgtgcgtgatgcgggcgatgccacggcgcccgccttcgaccgcgtc
ctcaaggacaaggcggccggtgacacgctggtggtggcggaggcgggcgagttgcgcgcc
ggcagtccgttgcgcaagctcttcgagacggccgccgctgccgccgcagtgccttgctac
gtggatgaaggggcggcgctggagcggatcctgcgcgagaccctgtcccggtttcgcgtc
aacctcgatggcgacgccgcacactggctcgcggcccacctgggcggcgatcgcggggtg
ttgcgcggcgaggcggagaagcttgccctctatgtcggcgacggcggccgggtgacggtg
gaggactgcatcgcggtcgtcggagacagtgccgagatcgcgctcgatgcggtggtcacc
gcgaccgccggtggcgaccgacagcggttggagcggctcctcgaccgggtgttcgccgag
ggcgagcagccgatccgggtcctgcggtcgctgcagcggcattatctgcgcctgctgggc
ctcgccgcagccgtcgaggccggcagcagtccccaggcggcggtggacgccttgcggccg
aagccgcacttcaaggaagccccccaccttgcggcacaggcccagcgctggtcgcggcgc
cgggtcgcctatgccctgtcgcgcctggccgatgccgaggcggactgcaagcggtcgagc
tttccgcccgagctggtctgccggcgggcgctcgacgacctgtcccgggtggcggcgccg
cggcgctga
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