Streptomyces violascens: HWN34_15325
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Entry
HWN34_15325 CDS
T08842
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
svio
Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svio03021
]
HWN34_15325 (sigM)
Transcription machinery [BR:
svio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWN34_15325 (sigM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
DUF746
HTH_17
HTH_28
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
QLA57804
LinkDB
All DBs
Position
3532529..3533245
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AA seq
238 aa
AA seq
DB search
MDEAISGAPDDAELLAAHVGGDPDAFGELVRRHRDRLWAVAIRTLGDREEAADAVQDALV
SAYRRAHTFQGRSAVTTWLHRITVNACLDRARKAASRRTSPMDDPEHLEQVLEPHESASA
PAERGDLRRQLAEALATLAPDQRAALVLVDMQGYPVAEAARILGVPTGTVKSRCARGRAR
LLPLVTHLRADSAAPDRDNDAVGGGRNRTQGASVPPAAGPRDQGPANSAAMKGGGGRA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaggccatatccggggcgccggacgacgccgaactgctcgccgcccatgtcggc
ggtgacccggacgccttcggcgagctggtcagacgccatcgcgaccgcctctgggcggtc
gcgatccggaccctcggcgaccgtgaggaggcggcggacgccgtccaggacgccctggtc
tccgcctaccgacgggcccacaccttccagggacgttcggcggtgaccacctggctccac
cggatcaccgtcaacgcctgcctcgaccgggcgcgcaaggcggcctcccgccgtacctcc
cccatggacgacccggagcacctggaacaggtgctcgaaccgcacgagtcggcctcggcc
cccgccgagcgcggcgacctacggcgccagctcgccgaggccctcgccaccctcgccccc
gaccagcgcgccgccctggtcctcgtcgacatgcagggctacccggtggcggaggcggcc
cgcatcctgggggtgcccaccggcaccgtgaagagccggtgcgcccggggccgggcacgg
ctcctaccgctcgtcacccatctgcgggcggactccgcagctccggacagggataacgac
gccgtcggcgggggaaggaaccggacgcagggggcatccgtcccaccagcggcaggcccg
agagaccaggggccggccaattcggctgccatgaagggcggaggtgggcgagcgtga
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