KEGG   Shewanella vesiculosa: KDH10_000595
Entry
KDH10_000595      CDS       T08322                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
svm  Shewanella vesiculosa
Pathway
svm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:svm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KDH10_000595 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:svm02044]
    KDH10_000595 (tssH)
Secretion system [BR:svm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KDH10_000595 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_16 ClpB_D2-small AAA_5 AAA_22 nSTAND3 Sigma54_activat ATPase_2 IstB_IS21 AAA_14 SLFN-g3_helicase AAA_7 TniB AAA_25 AAA_18 Zeta_toxin NACHT AAA_24 Hpr_kinase_C Not3 Rad17 Clp_N DUF815 SRP54 Lipoprotein_20 GAS Cyclin_N ABC_tran_CTD Med14
Other DBs
NCBI-ProteinID: UJL43320
LinkDB
Position
686333..688939
AA seq 868 aa
MSAMTLSKLVGKLNPVCRQSLETAASVCHSRSQFSVEIEHWLLALLENGSGDLDIIMASF
SVQKDQLINDIRQGLEKFKTGNSAAPSLSPHIVSLLRQTWLNTSIEFNDNETRTAYLIFT
LLTDDSLNSLVSRSAKQLLKIDPAQLKHAWPQLARQSTEHKVSSTDIEETQAMQSAPSKT
PNLDQFTQNLTEQAELGKIDPILGRDNEIRQMIDILTRRRQNNPILTGEAGVGKTAVVEG
LALKIVQKEVPTALQNVRIHVLDLALLQAGAGVKGEFENRLKALINEVKQSVKPIILFID
EAHTMIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKFFEKDAALTRRFQVVKI
DEPSPLQAIAMMRGLLPVMEGHHKILVSDQALCAAVNLSHRYITGRQLPDKAVSLLDTAC
ARVAMSQASTPGMVESLQRQIQQLDTQINILTREQKTGADHKKSITELTKKHKLLSKALE
PLMIQWQEELITVKKIADLVTQIQSSQTDTVAQLQELTELKANLAVNKQPMVHWQVDEQL
VAEVISDWTGIPAGKMQSDEIKTILNLKETMSKRVIGQDHALDLIAKTVQTSRAQLGDEK
RPIGVFLLTGPSGVGKTETALTLAEQVYGSEDNVTVINMSEFKEEHKVSLLLGSPPGYVG
YGEGGVLTEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGMIKDGEGRDIDFKNTIII
MTSNAGTETTMGLFEDEQIAPSITGLRKALQDDLLGYFKPAFLGRLNVIPYIPLTQYMLN
QITKLQLQRVAHRLAEHYQAKFTYSDDVVSQIVSMCQDAGSGARNVHNILQNTMLPDLSV
KILNNMANNKKTTNVKVNVVKEEFVYKI
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgtcagcgatgactttgagtaaattggttggaaaacttaatccagtatgtcgacaatct
ttagaaactgctgccagtgtatgccatagccgcagtcaatttagtgttgaaattgagcac
tggttactagcattattagaaaatggttctggtgatttagatatcatcatggccagtttt
tcagtgcaaaaagatcagttgatcaacgacattcgtcagggattagaaaaatttaaaacg
ggtaatagtgcggctccgagtctatcgccacacattgtcagtttattacgtcaaacctgg
ttaaataccagcattgaatttaatgataatgagaccagaacggcctatcttatttttacg
ttattgacggatgattcgttaaactccttagtatcacgctctgctaaacagttactcaaa
atcgaccctgcgcagctaaaacatgcttggccacaacttgcgcgtcaatctacagagcat
aaagtgtcgagtaccgatattgaagaaactcaggcaatgcaatctgcgccaagcaaaaca
ccaaatctagatcaatttacgcaaaacttaaccgaacaagctgaattaggcaagattgat
cctatccttggtcgtgataatgaaataaggcaaatgatcgatattttaactcgccgtcgt
caaaataatcctattttaaccggtgaggccggcgtcggtaaaacagccgtagtggaaggt
ttagcacttaaaattgttcaaaaagaagtgccaactgcattgcagaatgtccgtattcat
gtgctggacttggctttattgcaagctggagctggtgtaaaaggtgagtttgaaaatcgt
ttaaaagcgcttattaacgaagttaaacaatcggttaaaccaataattttatttattgat
gaagcacacactatgatcggtagtggtggacaagcaggacaaaatgatgccgctaattta
ttaaaacccgccttagcccgcggcgaattacgtactattgcggcaacaacctgggctgaa
tacaaaaagttttttgaaaaagatgcagccttgactcgtcgttttcaggttgtaaaaatt
gatgagccatctcctctgcaggcgattgcaatgatgcgaggactattacctgtaatggaa
ggccatcataagattctggtttcagatcaagcgttatgtgccgcggtaaatttatctcat
cgttatattactggacgtcagttgccagacaaagccgtgagtttattagacacagcttgt
gcccgtgtggctatgagccaagcatcgacaccgggaatggttgagtccttacagcgacaa
attcagcaactcgatacccagattaatattctcactcgcgaacaaaaaaccggtgcagat
cataaaaaatccattactgaattaaccaagaagcataagttactctcaaaagcacttgag
ccattaatgatccagtggcaggaagagttgatcacggtgaagaaaattgctgatttagtg
acgcaaatccaatcatcacagactgatactgttgctcaattacaggaactgacagagttg
aaggctaatttagctgtcaataaacagcctatggtgcattggcaagttgatgaacaactt
gttgctgaagtgatttccgactggactgggattcctgcaggaaaaatgcaaagtgatgaa
attaaaacgattttgaacttgaaagaaaccatgtctaagcgggttatcgggcaagatcat
gcattagatttaattgcgaaaacggtacaaacgtcgcgcgcccaattaggtgatgaaaaa
cgcccaatcggtgtgtttttgctgacgggacctagcggtgtaggaaaaactgagaccgca
ctaaccctggctgagcaagtttatggcagtgaagataatgtcaccgttatcaatatgtca
gagtttaaagaagagcataaagtatccctactattaggctcacctcctggttatgtcggc
tatggcgaggggggagtattaaccgaagctgttcgccgtaagccctatagcgttatttta
ttggatgaaatggaaaaagcgcatcctggtgttcaagatattttttatcaggttttcgat
aaaggtatgatcaaggatggagaagggcgagatatcgacttcaaaaatactattatcatt
atgacctcaaatgcaggaactgaaaccactatggggttgtttgaagatgaacagattgcg
ccctctattactggtctgcgtaaggcgcttcaagatgatttattgggctattttaaaccc
gcattcttaggccgcttgaatgtgattccttatattcctcttactcaatatatgcttaat
cagatcacgaaattacaattacagcgagttgcccatcgcttagcagagcattatcaagct
aagttcacttacagtgatgatgtcgttagccaaatcgtgtctatgtgccaagatgccggt
tctggcgctcgaaatgtgcacaatattttacagaatacaatgttgccagatctttctgtt
aagattttaaacaatatggcgaataataaaaaaacaactaatgtaaaagttaatgtcgta
aaagaagaatttgtatataaaatttag

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