Shewanella violacea: SVI_0048
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Entry
SVI_0048 CDS
T01206
Name
(GenBank) conserved hypothetical protein
KO
K03976
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_0048
Transfer RNA biogenesis [BR:
svo03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Trans-editing factors
SVI_0048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_edit
Motif
Other DBs
NCBI-ProteinID:
BAJ00019
UniProt:
D4ZD97
LinkDB
All DBs
Position
complement(49977..50444)
Genome browser
AA seq
155 aa
AA seq
DB search
MTPAINALKKAKIEFVIHEYHHQPGCDSYGLEAAEKLGLQLEQVFKTLVVQLDGKQLVVA
IIPVDSKLNMKLIAKAAQAKKAAMANADDVQRSTGYKLGGVSPIAQKKTLKTYIDISAEN
HLQIYVSGGQRGLDIELAPEQLQLITKARLAALTN
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgactccagcaatcaatgcactaaagaaagccaaaatagaattcgtcatacatgaatat
caccatcagcctggttgtgactcttatgggctagaagcggcagaaaaattaggtttgcag
cttgaacaagtgtttaagacattagtcgttcagctcgatggcaaacagcttgtggttgcc
attattcccgtcgactccaaactcaatatgaaactcatagccaaggcagcgcaagctaag
aaagccgccatggccaatgccgatgatgtgcaaagatctactggctataaattgggaggt
gtcagtccaatagcacagaagaaaaccctaaagacctacatagatattagtgcagagaat
cacttacaaatatatgtcagcggcggtcagcgaggattagacattgaactggcgcctgag
cagctacaactaataaccaaggcacgactcgctgccctcacgaattaa
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