Shewanella violacea: SVI_2416
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Entry
SVI_2416 CDS
T01206
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
svo
Shewanella violacea
Pathway
svo00470
D-Amino acid metabolism
svo00550
Peptidoglycan biosynthesis
svo01100
Metabolic pathways
svo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SVI_2416 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SVI_2416 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SVI_2416 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
SVI_2416 (ddlA)
Enzymes [BR:
svo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SVI_2416 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
Precursor biosynthesis
Amino acid ligase
SVI_2416 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
RimK
Glyco_hydro_36
Motif
Other DBs
NCBI-ProteinID:
BAJ02387
UniProt:
D4ZL38
LinkDB
All DBs
Position
2774733..2775743
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AA seq
336 aa
AA seq
DB search
MSQTNLLLICGGGGDEHAISLMSAKFFETSLAKLAHINLLKIELDAQGHYRTQAGELCEL
TNRKQIRFDDVNKASWPVDYVIPCIHGYPGETGDIQSYFELIKLPYFGCDSEASRNCFNK
VTAKMWFSALGIPNTPYIFLNDFNDDAINQAQQALASWGSIFIKAASQGSSVGCYRVDSP
EELTESLKQAFTYSPYVIVEKTIEARELEVAVYEKDGEIIATQPGEIICGTNTFYTFDEK
YAENSQAETKVVADISESVSQEIREYAVKVFKGMKLSHLSRIDFFLTADNEILLNEINTF
PGLTPISMFPKMLQNHGDNFSDYLNHNIMQQLSKKD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacaaatctactgttaatatgtggtggcggtggggatgaacacgcaatctca
ctgatgtcagccaagttttttgagacttcactggccaaattagcccatataaacctatta
aaaatcgaactcgacgcacagggacattatcgaacccaagcaggtgaactctgtgaattg
accaatcgtaaacagatacgtttcgatgacgttaataaggcgtcctggccggtagattac
gtcattccctgtattcacggttatccgggagaaaccggtgacattcaatcttatttcgaa
ctgatcaagttaccctatttcggttgcgattcagaagcgagccgtaattgcttcaacaag
gtcaccgctaagatgtggttctcggcccttggcatccccaataccccctatattttcctc
aatgactttaacgatgacgccatcaatcaagctcagcaggctttagcctcttggggctcg
atattcatcaaggccgcgtcacaaggatcatctgttggttgttaccgtgtagacagcccg
gaagaattaactgagtcattgaagcaagcgttcacctattcgccctatgtcatcgtcgag
aagaccattgaagccagagagttggaagtggccgtatatgagaaagatggtgagattatc
gcaactcagccaggtgagataatctgcggaactaataccttttatactttcgatgaaaag
tacgccgagaacagccaagccgaaacgaaagtggttgccgatatcagtgagagtgtgagc
caggaaattcgtgagtatgcagtcaaggtattcaagggaatgaaactcagtcacctttct
cgtatcgatttcttcctcactgcggataatgaaattctcctcaatgaaattaataccttc
ccaggtctcactcccatctccatgttccctaagatgctacaaaatcatggtgacaatttc
agtgattaccttaaccacaacataatgcagcaactcagcaagaaagactga
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