Shewanella woodyi: Swoo_0170
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Entry
Swoo_0170 CDS
T00676
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
swd
Shewanella woodyi
Pathway
swd00190
Oxidative phosphorylation
swd00860
Porphyrin metabolism
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Swoo_0170
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Swoo_0170
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
swd01006
]
Swoo_0170
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
swd03029
]
Swoo_0170
Enzymes [BR:
swd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
Swoo_0170
Prenyltransferases [BR:
swd01006
]
Compound prenylation
Protoheme farnesyltransferase
Swoo_0170
Mitochondrial biogenesis [BR:
swd03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
Swoo_0170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
DUF3040
Motif
Other DBs
NCBI-ProteinID:
ACA84471
UniProt:
B1KM58
LinkDB
All DBs
Position
complement(208139..209047)
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AA seq
302 aa
AA seq
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MAKPLSISSSDTQSQPLQWRAYYEMTKPKVVALMLLTVLVGMCLALPGAVPLQPLIFGLL
GIGMMAGAAAAFNHLIDRRIDGLMARTYNRPLPKGRVSITKALTFSISLAVLGFVLLYTL
VNELTAWLTFASLLGYAVVYTAYLKRATPQNIVVGGLAGAMPPLLGWTSVTGEFHGNALL
LVIIIFAWTPPHFWALAIHRKAEYAKVDIPMLPVTHGTEFTKTCILLYTILLAIACLLPV
LVGMCGPLYLVGSTLLSCGFIYKSWELKFDDKPGLAMQVFRFSIYHLMLLFIVLLVDHYL
WV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccactttctatctcgtcaagtgacacccagagtcagccactccaatggcgc
gcctattatgagatgacaaagcctaaagttgtcgccttaatgctactaactgttctagtg
ggaatgtgtctggcactacccggggctgtgccattacagccgctgatctttggacttcta
ggtatcggcatgatggctggcgcagcagccgcctttaaccatttaatcgatcgacgcatc
gatggattgatggctcgcacctataacagacctctacctaagggacgtgtttcgataacg
aaagcgttaaccttctctatctctcttgctgtactaggctttgttttactctacaccttg
gtcaatgagttaaccgcttggttaaccttcgccagcttactcggttatgctgttgtctac
accgcttacctcaaacgagccacgccgcagaatattgttgtaggggggttagcgggagct
atgccaccattattaggctggacatcggtgactggagagtttcacggcaacgccctgtta
ctggtcatcattatttttgcttggaccccgccccacttttgggcattagctatccataga
aaggctgaatacgccaaagtggatatccccatgctaccagtcactcatggtacagaattt
accaaaacctgtatcttgctttacaccatactgcttgcaatcgcatgccttctcccagtt
ttggttggcatgtgtggcccattatatctggtaggttcgacacttttgagttgcggcttt
atctataaatcctgggaactaaaatttgatgataaacctggtttggcgatgcaagttttc
cgcttctccatctatcacttaatgttgttatttatcgtgcttttagtcgaccactacctt
tgggtttaa
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