Shewanella woodyi: Swoo_2026
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Entry
Swoo_2026 CDS
T00676
Name
(GenBank) ABC transporter related
KO
K03701
excinuclease ABC subunit A
Organism
swd
Shewanella woodyi
Pathway
swd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Swoo_2026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_2026
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Swoo_2026
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Swoo_2026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_29
SMC_N
AAA_16
nSTAND1
RsgA_GTPase
AAA_21
Viral_helicase1
AAA_23
SLFN-g3_helicase
nSTAND3
DnaJ_CXXCXGXG
Herpes_Helicase
RNA12
Motif
Other DBs
NCBI-ProteinID:
ACA86310
UniProt:
B1KRA3
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All DBs
Position
2488555..2491011
Genome browser
AA seq
818 aa
AA seq
DB search
MMSTAITMQGVNTHNLKDIDISIPKNKMVVVTGVSGSGKSSLIIDTLFEYSKSLYIGALS
SKSFDMGEGSYQVERVSGTQPPVALKQSVKRLANPRSTIGTVTGIDGLIRLLFAHAGKPS
CPACFQELNSELFCDDCGLYGETLSAKQFSPNRKEGKCLQCNGLGKLASFSVDLIIPDKT
KSLNWIWDNAEPNTFSLPNLRKAFEAMCADEGIDIDCPYSSLSDEAKQRALYGTDKGYTI
KVGKVTNDIVFTGIIGYQEYSYKKTTSVTRQKAFERYIGEQHCPGCDGARLRPESLAVKV
VGKNFNDCQCMAIGDMTYWLSSMIQDGTLPVGVHELANAIINQGHNIVNVGLGYLCLNRE
SASLSGGELQRILLAQHVASDLSGVMYVLDEPTIGLHEEDTLKLLDSMRQLRDLGNSLVV
IEHDETIIRAADWIIEIGPGAGSKGGEVIFQGSYEELIDCQASATAKFFRSRDKLSSHIP
PMKEWFTINDLHRNNLKIDTVSFPVNALTCVTGVSGSGKSSLVSSIYDEAQRLIGARAKR
KELQSNLQGVEVFNDIIYVEQKPIGRSSRSTIATYLGISDDIRDMFAESNDAIAAGYERK
HFSSNVAGGRCEACKGQGYIELDMSIFKNEEVLCEECDGKKFQPQILDIKVHNKNIYDVL
NMTVDELVLHFSVDAYPSIHRALSCLAEFGLGYLVLGSATTTLSGGEAQRLNLATKLLKT
KLQSSLFIFDEPTRGLHFSDIRYLLALFDRLLSDGHTVLLIEHNLDVICQSHWIVDVGPE
GGDKGGEIVFEGGIDTMLCSSDSLTAIHVKRHVADYYQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtaccgcaattacgatgcaaggggtaaatacccataacctcaaagatatcgat
atctcaattcctaagaataaaatggtcgtggtaacgggggtttctggttctggaaaatcc
tcattaataatagataccttatttgaatactctaagtcactatatattggtgctctttcc
agtaagagctttgatatgggggagggaagctatcaagtagagagagtgagtggaacacaa
cctcctgtagcgttgaaacaatcggtaaagagacttgcaaatcctcgctctacaatagga
actgtgacaggtatagatggcttgattcgattgttgtttgctcatgctggtaagccctcg
tgtcctgcttgttttcaagaactaaacagtgagctattttgtgatgactgcgggctgtat
ggagagacattatctgcaaaacaatttagcccaaatagaaaagagggaaagtgtttacag
tgtaatgggttaggtaaattagcttcttttagtgttgatcttatcattcctgataaaacg
aaatcactcaactggatttgggataatgcagagcccaacacgtttagtctccctaattta
cgtaaagcctttgaagccatgtgtgcggatgaagggatagatatcgattgcccttactct
agtttgagtgatgaggctaaacaaagagctttatacggtactgataaggggtacacaata
aaagttggaaaggtaactaatgatattgtatttactgggattattggttatcaagaatac
tcttataaaaaaacaacgtcggtaacacggcaaaaagcttttgaacgatatattggtgag
cagcattgccctggttgtgacggtgcgaggttaaggcctgagtcacttgcggtgaaagtt
gtgggcaagaacttcaatgactgccaatgtatggccatcggtgatatgacctattggcta
tctagtatgattcaagatggtactttaccagttggggtgcatgaactggcgaatgccatt
atcaatcaaggccataatatcgtaaatgtggggcttgggtatctgtgcttaaatcgtgag
tcagcttctctttctggaggagagttgcaacgaattttactggctcaacatgttgcgagt
gatttaagtggggttatgtacgtacttgatgaaccaaccattggattgcatgaggaggat
acgctcaagttactcgactctatgcggcaactacgagaccttggtaattcattagttgta
attgaacatgatgagacgattattcgtgcagcagactggatcattgaaattggtccagga
gccggttccaaaggtggtgaggttatatttcaaggctcatatgaggagttaattgactgc
caagcttcagctacagccaagttttttagatctcgagacaaactttcaagccatatccct
ccgatgaaagagtggtttactattaacgatcttcatcgaaataatctaaaaatagataca
gtttcttttcctgttaacgcattaacttgtgtcactggtgtgtcaggatcgggtaaaagc
tcgctggttagttccatctatgatgaagcgcaaagattgattggcgcacgggctaaacga
aaagagcttcaatctaaccttcagggagtggaggtgtttaacgatattatctatgttgaa
caaaagcctattgggcgatcaagtagaagcacaattgcgacttacctaggtattagtgat
gatattagagatatgtttgctgaatcgaatgatgcgatagctgcaggctatgagcgcaaa
cactttagttccaatgtcgctggtggtcgatgtgaagcgtgtaagggacaaggttacatt
gaactggacatgtctatctttaaaaatgaagaggtattgtgtgaagagtgtgacggtaaa
aagtttcaacctcaaatattagatatcaaagttcataataagaatatatacgatgttttg
aatatgaccgtcgatgaactggttctccattttagtgttgatgcatacccatctatccat
cgagccttaagttgtcttgctgagttcggtctaggttacctagtacttggtagtgcaaca
actactctttctggtggtgaagctcaacgtttgaacttggcgacaaagttgctaaaaaca
aaattacagagttctctgtttatctttgatgaaccaactagagggctgcatttttctgat
attcgatatctcttagcactatttgatcgacttctttctgacgggcataccgttttattg
attgagcacaaccttgatgtgatatgtcagtctcactggattgttgatgtggggccagaa
ggtggggataaagggggagaaatagtgtttgagggggggatagataccatgctttgttct
tctgattcacttaccgctattcacgtgaaaaggcatgttgctgattattatcagtag
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