KEGG   Formicincola oecophyllae: E3E12_02330
Entry
E3E12_02330       CDS       T06093                                 
Symbol
cas3f
Name
(GenBank) type I-F CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
swf  Formicincola oecophyllae
Brite
KEGG Orthology (KO) [BR:swf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:swf02048]
    E3E12_02330 (cas3f)
Enzymes [BR:swf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     E3E12_02330 (cas3f)
Prokaryotic defense system [BR:swf02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    E3E12_02330 (cas3f)
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3_HD HD
Other DBs
NCBI-ProteinID: QDH13228
UniProt: A0A4Y6U9K1
LinkDB
Position
complement(514127..517750)
AA seq 1207 aa
MQVLLVSECEKKAKAETRRIVDQFACRTGGNTWLASMTEEGLQTLHAMLKRTARRNTAVA
CHRLGGPAGMELLWIVGNRERFDGLTGTVPTNSTQRLIMAEGENDDPNAPLVQALARLAA
LLHDLGKTAQAFQRKLRSGKIEKACYRHEWATVWMLRNLVRNSQQGDGPPSDVAWLERLA
KGAGTKAAHWLDEPPSTDSEAMRQYLLKDLPPVARAVAWLVLTHHRMVAPPRSESTNKSA
ATLIDLEQPWRFLKATWNDAVPPGSVTDFKRYWSFPTVGAVVGDKRWQGALARRAGALLA
LCASWNPGKAHEMCMDVSILHCARLCLMLADHYFSSKQAFTLPSSPLAAIDLKKTPFANT
AKRPSTGQMELHQTLVEHLLGVEKQASSLSRALPGLGSVLEGLGDCAPLKKMVNKNESAL
QPYRWQNKAVEEAQALYSQHNPGQAGAFVINMASTGCGKTLANGKIAYALNGSGEGSGPG
LRLTVALGLRVLTRQTGAALQKHLGLAPSKASSGDGQVAVYAGGGTSAAIADWLQNRAEE
SGSESTAEVLLDPEGDVSAPLGSSGDEAWRLDELLRHPVLRALAKHHEGKQPSQKRDLKA
LEMVRVPVLACTVDHMVPVADCTRGPGGLAPMLRLMSSDLVLDELDDYGLADMPALMRLV
WWAGVLGSRVVLSTATLPGTMAAGMFEAWHHGRAVWWQNHAGAEGAPMPAVPCLWVDEFN
SQTELCADEEGFRQAHGAFVKKRRVALKNIASEAPKQRGEIMALGALKPPDYGRQELGQD
FWDEIALAVRDKALEMGRRHHEKALGGRTISLGLVRMANVEPLIEVARALERLGSGREDT
HIHLCVYHARFPLICRQAIEHGLDQVFDRHAKTPPLAERPLLAGAMNTPKAKAAKHHVFV
VLASPVCEVGRDWDADWAIAEPSSMRSIIQLAGRVRRHRGVEVSIKSLHPNIALWNWNVR
GLENEAEAYCKPGYEGTPNATTNPNHLASHELSAITQPDEWQTITSLPRLAGHLKQEVKK
ADGQLDIWPQEKINTYQSLTQLELGATAQAMLPWQMREAFSEAAQQAPIKSSFRTYAPLC
WLYGSSALTAILPQSQPFRESSPEDEDTFCFQLNDDEQPILHQVLDQRSGQAGEMGYACK
AFPTQECGAGISPWNRPDMVELVQAWVGEHGDMAAAFPTQTQLTAPRHRAGNLWRYSDWL
GLSVKEG
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgcaggtcctactggtttcggaatgcgagaagaaagccaaagctgaaaccaggaggatc
gtggaccagttcgcctgccggacaggtggaaacacctggcttgcctccatgacagaggaa
ggtctgcagaccctccatgccatgctcaagcgcacagcgcgccggaacacggccgtggct
tgccaccgcctaggtgggccggcaggcatggagcttttgtggattgtgggcaaccgtgaa
cgctttgacggcttgacggggactgttcccaccaacagcacccagaggctcatcatggct
gaaggggagaatgacgatcccaacgcgccccttgtacaagccttggcgcgcctggcggcg
cttctgcatgatttgggcaaaactgcccaggcattccagaggaaattgcggtcagggaaa
atagagaaagcctgctaccgccatgaatgggccaccgtctggatgctgcgcaacctggtg
cgcaacagccagcaaggcgatgggcccccttcagacgtggcgtggcttgaaaggctggct
aagggtgcgggcaccaaagcggcccattggctggatgagcccccctccaccgacagtgaa
gccatgaggcagtatcttctaaaagacttgccgcctgtggcgcgtgctgtggcgtggctg
gtcctgacccatcaccgtatggtggcgcccccgcgcagcgaatccacgaataaatccgcc
gcaacattgatcgacctggagcagccatggcgtttcctcaaggccacatggaatgacgcg
gttcctcctggcagcgtaacagacttcaagcgctattggtctttccccacggtgggtgct
gtggtgggggataagcgttggcagggcgccctagcgcggcgcgctggtgccttgttggcg
ctgtgcgcgtcctggaatcccggaaaggcccatgaaatgtgcatggatgtttccatcctg
cactgcgccaggctgtgcttgatgctagctgaccactatttttcgtccaagcaggccttc
acgctgcctagcagtcccttggcggcgattgacttgaaaaagaccccttttgccaacacg
gccaagcgcccttccacaggccagatggagctgcaccagactttagtggaacatttgctg
ggggtggagaagcaggcctcttccctcagcagggctttgccagggcttggcagcgttctg
gaggggttgggcgattgcgcgcccctcaagaaaatggtcaacaagaacgaaagcgctttg
caaccttaccgctggcagaacaaagccgttgaggaggcgcaggccctttacagccagcac
aaccctgggcaggcgggggcttttgttattaacatggccagcactggctgcgggaaaacg
ctggccaatggcaaaatcgcctatgcccttaatggctctggcgaagggtcgggcccaggg
ctgcgcttgacggtggcgctggggctgcgcgtgttgacgcgccaaactggcgccgccctt
caaaagcacctgggcttggcgccttccaaagccagcagcggcgatgggcaggtggccgtt
tacgctggtggtggcaccagcgctgccatcgctgactggctgcaaaacagagctgaggaa
agcgggtctgaatcaacagctgaggtgttgctggacccggagggggacgtcagcgccccc
ctgggcagcagcggtgatgaggcctggcggcttgatgaactgctgcgccaccctgtgctg
cgcgccctggccaagcaccatgaaggcaagcagcccagccagaagcgcgacctcaaggct
ttggaaatggtgcgggtgcctgtgctggcctgcacggtggaccacatggtgcctgtggct
gactgcacccgtgggcctgggggcctggcccccatgctgcgtttgatgagcagcgacctg
gttctggatgagctggatgattacggtttggccgacatgccggccttgatgcgcctggtg
tggtgggctggggttctgggcagccgggtggtcctgtcaaccgccaccctgcctggcacc
atggcggccggcatgtttgaggcctggcaccatggccgggccgtgtggtggcaaaaccat
gctggcgcagaaggcgcgcccatgcccgccgtgccgtgcctgtgggtggatgagttcaac
agccaaacagagctttgcgctgatgaggaagggttccggcaagctcatggcgcttttgtg
aaaaagcgccgcgttgcgttgaagaatatagcttcggaagcccccaagcagcggggggag
atcatggcgttgggtgcccttaagccccctgattatggccgccaggagcttgggcaggat
ttctgggatgagatcgccttggccgtgcgtgacaaagccttggaaatgggcaggcgccac
catgaaaaagcactggggggcaggaccatttccttaggcttggtccgcatggccaatgtg
gagccccttattgaggtggcgcgcgctttggaaagactgggcagcggccgcgaagacacg
cacattcatttgtgcgtctaccatgctcgcttccccttgatttgccgccaagctattgaa
catggccttgaccaggttttcgaccggcatgccaagaccccacctttggcggaaaggccc
ttgctggctggggccatgaacaccccgaaagccaaagcagccaagcaccatgtgtttgtg
gtgctggccagccccgtctgcgaagtggggcgggattgggacgctgattgggccattgct
gagcccagctccatgcgctccatcattcagttggcggggcgtgtgcggcgccaccgcggc
gtggaggtcagcattaagtccctccaccccaacatcgctttgtggaactggaatgtgcgg
gggttggaaaacgaagctgaagcctactgcaagccaggctatgaaggcacccccaacgcc
accactaaccccaaccatctggccagccatgaattgtccgccatcacccaacctgatgaa
tggcagaccatcacatcgcttccacgcttggcagggcatttgaaacaagaggtgaaaaaa
gctgatggccagttggacatatggccgcaggaaaaaatcaacacttaccaaagcctgacc
cagctggaactgggcgccacggcgcaggccatgctgccatggcaaatgcgtgaagcgttt
tcagaagcggcccagcaagcacccatcaaatcatcatttcgcacttacgcccccttgtgc
tggctttatggaagcagcgccttgacggccattctgccccaaagccagcctttccgtgaa
tcaagccctgaagacgaagacacattctgctttcagctgaatgatgacgaacagccaatt
ctccaccaagtgttggaccagcgcagcgggcaggctggggagatgggctatgcgtgcaaa
gccttccccacccaggagtgtggggctgggatcagcccctggaacaggcctgacatggtg
gaattggtgcaggcttgggttggtgagcatggtgacatggcagcggccttccccacccaa
acccagctcaccgccccccgccaccgggcaggaaacctatggcgttacagtgattggctg
ggtttgagcgtgaaagaggggtaa

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