Formicincola oecophyllae: E3E12_05340
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Entry
E3E12_05340 CDS
T06093
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
swf
Formicincola oecophyllae
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swf03021
]
E3E12_05340 (rpoH)
Transcription machinery [BR:
swf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E3E12_05340 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
PgaD
ARA70
HTH_11
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QDH14408
UniProt:
A0A4Y6UCV2
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All DBs
Position
complement(1212148..1213119)
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AA seq
323 aa
AA seq
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MAPGPERARNLPVISTQKALDRTARKKTPNLPVLSSPEDNLSRYLQEIRRYPLLTPEEEL
ALARAWFYDQDREAAHRLVTSHLRLVAKIAMSYRGYGLPVSELISEGNIGIMQAVRRFDP
ERGFRLATYAMWWIRAAMQEYILHSWSLVKMGTTAAQKKLFFNLRRLKGQMQAFDEGDLH
PEQVAQIATSLDVPEQDVISMNRRLAAPDHSLNAPLRVEGEGEWQDWLVDDQDSQEESLA
RDEEMGKRRALLSKAMGGLNEREKHILKERRLKDEPSTLEELSKHYGVSRERIRQIEARA
LEKIQNSMAGAVENSHRDKGLQD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctggcccagagcgggcgcgcaacctaccggtaatttccactcaaaaagccttg
gaccggacagcgcgcaaaaaaacacccaacctgcctgtcctcagcagccctgaagacaat
ttatcacgctacctacaggagatcaggcgttaccccttgttgacccctgaggaggaactg
gccttggcccgggcctggttttacgaccaggacagggaggcagcacaccgcctggtgacg
tcacatctgcggcttgtggctaaaatcgccatgagctaccgcggctatgggttgcctgtc
agtgaacttatcagtgaaggcaacattggcatcatgcaagctgtgcggcgttttgaccct
gagcgcggcttcaggctggccacttacgccatgtggtggatcagagccgccatgcaggaa
tacattctgcacagctggtccttagtcaaaatgggcactaccgcagcgcagaagaagctg
ttcttcaatttgcggcgcttgaaagggcaaatgcaggccttcgatgaaggcgacctgcac
ccagagcaagttgctcaaatcgcgacttcgcttgacgttcctgaacaggacgtcatctcc
atgaacagacgcttggcggcgccagaccacagccttaatgcgcctttgcgcgttgaggga
gaaggagaatggcaagattggcttgttgatgaccaagacagccaagaggaaagcctggcc
cgtgatgaagagatgggcaaacgccgtgccttgctctctaaagccatgggtggcctcaat
gaacgcgagaaacacatcctgaaggaaaggcgcttgaaagacgaaccatccaccttggag
gaactttcaaagcactatggcgtttcacgcgagcgcattaggcagattgaggcccgtgcc
cttgagaaaatccaaaacagcatggcaggcgccgttgaaaacagccaccgtgacaaaggt
ttgcaagattaa
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