KEGG   Rhizorhabdus wittichii RW1: Swit_0060
Entry
Swit_0060         CDS       T00538                                 
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
swi  Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:swi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:swi03021]
    Swit_0060
Transcription machinery [BR:swi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Swit_0060
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r1_2 KORA HTH_19 EF-hand_8 DUF5401
Other DBs
NCBI-ProteinID: ABQ66433
UniProt: A0A9J9H7M3
LinkDB
Position
complement(58880..59785)
AA seq 301 aa
MASGKNVPATIPALGGEQSLNRYLAEIRKFPLLTAEEEYMLAKRFQEHGDPEAATRLVTS
HLRLVAKIAMGYRGYGLPASELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIKASIQEY
ILRSWSLVKMGTTAAQKKLFFNLRRMKSQLEAFEDGDLKPEDLKKIATDLGVSEEEVTSM
NRRMSMGGDASLNVSMNEDGEGEWQDMLVDQGPLQDERLAEVEEKSVRHNMLNEALAALN
DREKHILVERRLVDEPKTLEELSQVYGVSRERVRQIEVRAFDKLQKAMMRIAGEKRLLPA
M
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcaagcggaaagaacgtgcccgccacgatccccgcgctgggcggggagcagagcctc
aaccgctatctggccgagatccggaagtttccgctgctgacggcggaagaggaatatatg
ctcgccaagcgcttccaggagcatggcgatcccgaggcggcgacccgtctcgtcacctcg
cacctgcgtctcgtcgcgaagatcgcgatgggctatcgcggctatggcctgccggccagc
gagctcatctccgaaggcaatatcggcctgatgcagggcgtgaagaaattcgagcccgac
cggggcttccgtctcgccacctatgcgatgtggtggatcaaggcgtcgatccaggaatat
atcctgcggtcgtggagcctggtgaagatgggcaccaccgcggcgcagaagaagctgttc
ttcaacctgcggcggatgaagtcgcagctcgaagcgttcgaggacggcgacctcaagccc
gaggacctcaagaagatcgccaccgacctcggcgtgtccgaggaagaggtgacgagcatg
aaccgccgcatgtcgatgggcggcgacgcgtcgctcaacgtttcgatgaacgaggacggc
gaaggcgagtggcaggacatgctggtcgaccagggcccgctccaggacgagcggctggcc
gaggtcgaggagaagtcggtccgccacaacatgctcaacgaggcgctggccgcgctcaac
gatcgcgagaagcatatcctggtcgagcggcgcctggtcgacgagcccaagacgctcgag
gagctgagccaggtctatggcgtcagccgcgagcgagtccgccagatcgaggttcgcgcc
ttcgacaagctgcagaaggcgatgatgcggatcgccggcgagaagcgcctgctgccggcg
atgtga

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