Sutterella wadsworthensis: I6J16_00740
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Entry
I6J16_00740 CDS
T07195
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sws
Sutterella wadsworthensis
Pathway
sws03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6J16_00740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sws03400
]
I6J16_00740
Enzymes [BR:
sws01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I6J16_00740
DNA repair and recombination proteins [BR:
sws03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6J16_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QQS89995
LinkDB
All DBs
Position
135349..138912
Genome browser
AA seq
1187 aa
AA seq
DB search
MAKKDEALCAEMTAEQTDWTQLCAEAESVSADEQTAAYLEADEMDFASDAGEAPAADSSD
DSSFDMLRAPLMRPTLLEASAGTGKTFSIKHLVLRFVAEEDVSVSRMLIMTFTRAATAEL
KARIQSHLSAMHGLMTGTFADSAVDAVLLEQRALWAEQGRDPAVIVSRLRESLAQFDNAG
IFTIHGFCQKVLEDRAFTSGSSIGFELAENVDDLVEDVVNEFIRTSLLQLREREDRAAIS
DPGKWIEILKQLMAAPDDLVPSTIVSLPESPELAAAFQNFVKEAPKRLAQKKREARVKTF
DDLLIELYERLRGDPADAESRAQAERLAESIRSAFSVVLVDEFQDTDPIQYAVIRRLFLR
KREPHPVWFVGDPKQAIYRFRGADLETYLRARRDVEALYQTAGSGRFRGVYALTTNYRSS
PDLVRAFNAFWRTAPNPFLREDLAYLEVESSPKNLPLMQKRPDGTIMDAVPFEWVSSWQE
TPAQTAEERRQQQGIVLADRITAMIEAGRRGELLVPCADEEASLAVAEKDGKRLRGVLPG
DIAVLVRTHDEGLTAAEVLKHRGVRVRIRCDQNVCNTIEACEIGMILSAFAAPGDLKLLR
AARTTRLIGDDLACLDDQERDEIRRIALRGEFEYGARNWGTVGPAAALERLMTFCRTAER
LLPQANGERTLTNYRHLLELLHGAARIIPTPAGLAAWLAAEAKRPVSDFNRERLESDANL
VLVETIHSSKGLQYPIVFLPYTQSGSIDTHARCTSRTDDPQRSAQRCLELRFEAEKPDQR
VNQAEYEEKVRMMYVAMTRAARHLCIIGEQRIKSAVNPDQWHGSTVQAHLFRALTGQLTP
SRADILFAVERLAALQSPSGTPLFRFTELGAAAAGARSSLLAQGTVGESYTTARSQTRRS
EWRTSSFTGITRMAEDDGPGFSTWYGQAEKPPLVDDILSFPKGAQAGTCLHEMMERADFS
MMACDDEKAAAARLALTAREVEKHLSLPEKEAASAAAGAAAMIRDLLNAEVAPGVTLKDV
PKSARSAELEFLIPISASLTAERLVSELKAMDPKYDFGTLRPEDLKGFLTGFIDLAFSAG
GRFYVLDWKSNKISPEASGYTEKAMSAEMDVHLYRLQYLIYWVALRRFLQVRLGAHWRDE
MIGGAIYVFLRGVRADTTTAANPQGIVFDPVRPEVIRRMDDLFAGRA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaggatgaagcgctctgcgcagagatgacggcggaacaaacggactggacg
cagctttgtgcggaggctgagagcgtctcggccgatgagcagacggcagcgtacttagaa
gccgatgaaatggatttcgcatcagacgcgggtgaggcgcctgcggcagactcgtcggac
gattcgtcctttgacatgcttcgtgcgccgctgatgcgcccgaccttgctcgaagcctct
gccggcacggggaaaactttttcgatcaagcatctcgtgctgcgttttgttgcggaagaa
gatgtttcggtgagcagaatgctcatcatgacctttactcgagcggccacagcagaactg
aaagctcgtatccagtcgcatctctcggctatgcacggtctgatgaccgggacgtttgct
gactctgcggttgacgccgtattgctcgagcagcgcgctctctgggcagagcaggggcgc
gatcccgcggtcattgtgagccgtctgcgggagtcgcttgctcaattcgacaatgccggc
atcttcactattcacggtttctgtcaaaaggtgctcgaagaccgagcattcacctcgggc
agttcgatcggttttgaattggctgaaaacgttgacgatctcgtggaagatgtggtcaat
gaattcatccgtacctcactgctgcagctccgcgaacgcgaagatcgcgcagcgatcagt
gacccgggaaaatggattgaaatactcaagcagctgatggctgcgccggacgatttggtg
ccgagcacgattgtttcgctgccggagtcgccggagcttgccgctgcttttcaaaatttc
gtgaaggaagcgcccaagcgtttggcacagaaaaaacgcgaagcacgggtaaagaccttc
gacgatcttttgattgagctctacgaacgcctgcggggagatcctgccgatgcggaatcc
cgggcgcaggccgaacgcttggccgagagtatccgcagcgccttcagcgtggtgttggtg
gacgaatttcaggataccgatcctattcagtacgcggtcatcagacgcctctttctgcgt
aagcgcgaaccgcaccccgtgtggttcgtgggggatcctaaacaggccatctaccgcttt
cgcggtgccgatttggaaacctacctgcgggcacgccgcgatgtggaggcgctttatcag
acggccggaagcggtcggttccgaggcgtctatgcactgacaaccaactaccgctcgagt
cctgatttggtcagagccttcaacgcgttttggcgtaccgctccgaatcccttcctgcgc
gaagatctcgcttatcttgaagtggagtcgtcgccgaaaaatctgccgctcatgcaaaaa
cgccctgacgggaccatcatggatgcggtgccgtttgaatgggtgagcagctggcaggag
acgccagcacaaacggccgaggaacgtcggcagcagcagggcattgtattggccgatcgg
attacggcaatgatcgaggctggccggcgcggggagcttctggtgccctgtgctgacgaa
gaagcctctttagccgtggcggaaaaggacggcaaacggctgcgcggagtgctcccgggc
gacattgcagtcttggtgcgtacgcatgacgagggactgacggccgctgaagtgcttaaa
caccgcggcgtgcgagtgcggattcgctgtgaccagaatgtctgcaataccatcgaagct
tgtgaaatcggcatgattttgagcgcttttgcagcgcccggcgatttgaagctgctgcgc
gcagcccgtacgacgcggcttattggcgacgacctcgcctgcctcgacgatcaagagcgc
gacgaaataaggcgcattgcactgcgcggcgagttcgagtacggtgcgcgcaattggggg
acagtcggtcccgcggcagcgctcgagcggctgatgactttttgcagaactgcagagcgg
ttgctgccgcaagccaatggtgagcgcacactgacaaactatcgccatctgctggagctg
cttcacggcgcggcccgaatcattcctacgcctgccggactcgcagcatggctcgcggca
gaggctaagcgtcccgtcagtgacttcaatcgcgagcggcttgaaagcgatgccaacctt
gtgcttgtcgaaaccattcattcgagcaaagggctgcagtatccgattgtgtttctgccg
tacacgcagtcgggcagcattgacacccatgcgcgctgcacgtctcgaacggatgatccg
cagcggtccgcgcaaagatgccttgagctgcggtttgaggcagaaaaacccgatcagcgg
gtgaatcaggctgaatatgaagaaaaagtccgaatgatgtatgttgccatgacgcgagct
gcgcgccatctctgcatcatcggcgaacagcggattaaaagtgctgtgaatccggaccaa
tggcacggcagtaccgttcaggcgcatctctttcgagccttgacggggcagctgacgccc
tcgcgagcggacatcctgttcgcggtcgaacgcttggcggcgctccagtcgccctcaggc
acgccgctctttcgttttaccgaattgggtgcagcagctgccggcgcacgatcctccctt
ttggcgcaggggaccgtcggagagtcttatacgacagctcggtcacagactcggcgcagt
gaatggcgaacctcgagctttacgggcattacccgaatggctgaggacgacgggccaggg
ttttcaacctggtacggacaggccgaaaaaccgccgctcgtcgatgacattctgtccttt
cccaagggggcgcaggccggtacctgtctgcatgaaatgatggagcgcgccgacttttcg
atgatggcttgcgatgatgagaaagccgctgctgcccgcctggccttgacggctcgtgag
gtcgaaaagcatttgtcgcttcccgaaaaggaggcggcctcagcagccgcgggagcggcc
gcaatgatccgagatcttctcaatgcggaggtggcgcccggcgtgacgctcaaagacgtg
cccaaatcggcaaggtcggcggaacttgaatttctcattccgatttccgcctcgctgact
gccgaacggctcgtcagtgaactcaaggccatggatcccaaatacgatttcgggacgctt
cggcctgaagatctcaaggggttcctgacagggtttattgacttggcctttagtgcaggc
gggcgcttttacgtgctggactggaagagcaacaaaatttcgcccgaagcttccggctac
accgaaaaagccatgtcagctgagatggatgtgcatctttaccgcctgcagtatctgatc
tattgggtggctttgcggcgtttcctccaagtgcggctcggcgcacattggcgcgacgaa
atgattggcggcgccatttatgtgtttcttcgaggcgtacgggccgacacgacgacagcg
gccaaccctcagggtattgttttcgatccggtgcgtccagaggtgattcggcgcatggat
gatctttttgcgggcagagcctaa
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