Streptomyces xiamenensis: SXIM_20590
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Entry
SXIM_20590 CDS
T03904
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sxi
Streptomyces xiamenensis
Pathway
sxi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SXIM_20590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxi03021
]
SXIM_20590
03400 DNA repair and recombination proteins [BR:
sxi03400
]
SXIM_20590
Enzymes [BR:
sxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SXIM_20590
Transcription machinery [BR:
sxi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SXIM_20590
DNA repair and recombination proteins [BR:
sxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SXIM_20590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AKG43443
UniProt:
A0A0F7FT91
LinkDB
All DBs
Position
complement(2234673..2235695)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNNKGKLEMELTVERGRGYVSAVQNKAAGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVVDVETKEAMRPRDAMASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTTAADAFGAEDDGDTGFAETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctctttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagcccggcttcgggtacacgctcggtaactccctgcggcgt
acgctgctgtcctccatcccgggcgcggccgtcaccagcatccgtatcgacggcgtgctg
cacgagttctccaccgtgccgggcgtcaaggaggatgtgaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagcccgtggtgatgtacctgcgcaagcag
ggtcccggcctggtgaccgcggccgacatcgccccgccggccggggtcgaggtccacaac
cccgacctggtgctggccaccctgaacaacaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaaggcggcgggccaggagatcggc
cggatcccggtcgactcgatctacagcccggtgctgaaggtgacctacaaggtcgaggcc
acccgtgtggagcagcgcaccgacttcgacaagctggtcgtcgacgtcgagaccaaggag
gccatgcgtccgcgcgacgccatggcgtccgccggcaagaccctggtcgagctgttcggc
ctggcgcgtgagctgaacgtcgacgccgagggcatcgacatgggcccctcgccgaccgac
gcggcgctcgccgccgacctggcgctgccgatcgaggagctggagctgaccgtccgctcc
tacaactgcctcaagcgtgagggcatccactcggtgggcgagctggtggcccgctccgag
gccgatctgctggacatccggaacttcggtgccaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccaccgcc
gccgacgccttcggggccgaggacgacggggacacgggcttcgcggagaccgagcagtac
tga
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