Streptomyces xiamenensis: SXIM_29850
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Entry
SXIM_29850 CDS
T03904
Name
(GenBank) RNA polymerase sigma-70 factor, TIGR02952 family
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sxi
Streptomyces xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxi03021
]
SXIM_29850
Transcription machinery [BR:
sxi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SXIM_29850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AKG44369
UniProt:
A0A0F7FWQ6
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Position
complement(3241860..3242615)
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AA seq
251 aa
AA seq
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MSALSAALVPAGPAYVLAEGTAGTTSASPTPVPATPPEAARATTPAASAPSTGRRIPRNT
TARRPAADSDSRRMMDLVERAQAGETEAFGGLYDHYSDTVYRYIYYRVGGRATAEDLTSE
TFLRALRRIGTFTWQGRDFGAWLVTIARNLVADHFKSSRFRLEITTGEMLDANEVERSPE
DSVLESLSNTALLEAVRKLNPQQQECVTLRFLQGLSVAETARVMGKNEGAIKTLQYRAVR
TLARLLPDDAR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccctctccgccgcacttgtccccgccggccccgcctatgtcctcgccgaaggc
accgccggcaccacctccgcctcaccgacccccgtccccgccaccccacccgaggccgcc
cgggccaccacccccgcggcctccgcccccagcaccggcaggcgcatccccaggaacacc
accgcccgccgccccgccgccgacagcgacagccggcgcatgatggacctcgtcgaacgc
gcccaggccggcgagaccgaggcattcggcggcctctacgaccactactccgacaccgtc
taccggtacatctactaccgggtcggcggccgggccaccgccgaggacctcaccagcgag
acattcctgcgcgccctgcgccggatcggcacgttcacctggcagggccgcgacttcggc
gcctggctggtcaccatcgcccgcaatctcgtcgccgaccacttcaagtccagccgcttc
cggctggagatcaccaccggcgagatgctcgacgccaacgaggtcgagcgcagccccgag
gactccgtcctggagtcgctgtccaacaccgcgctgctggaagcggtccgcaagctcaac
ccgcagcagcaggagtgcgtcaccctgcgcttcctccagggcctctcggtcgccgagacc
gcccgggtgatgggcaagaacgaaggggccatcaaaaccctgcagtaccgcgcggtgcgc
accctggcgcggctgctgcccgacgacgcgaggtag
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