Shewanella xiamenensis: MKD32_13760
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Entry
MKD32_13760 CDS
T08228
Symbol
truC
Name
(GenBank) tRNA pseudouridine(65) synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxm03016
]
MKD32_13760 (truC)
Enzymes [BR:
sxm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
MKD32_13760 (truC)
Transfer RNA biogenesis [BR:
sxm03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
MKD32_13760 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UML92502
LinkDB
All DBs
Position
complement(3103609..3104445)
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AA seq
278 aa
AA seq
DB search
MNQDDIWLDMPESKQLNTDSDDVEAAPELHILYQDEHLVAIHKPAGLLVHRSYLARRERF
FAMQLTRDLVGCHVFPVHRLDRPTSGVLLFAKNSEVANALCEQFADHSIEKQYLALVRGN
MHESGVLDYALKVELDEVADKFSNQDKAAQEAVTQYEPLLNAEIPYPSGRYATSRFALVK
LSPKTGRKHQLRRHMAHLRHPIIGDTTHGDGKQNAFFRTHFDINRLWLIAKKLTFTHPIT
HERLSIETELEPEWETVFARLGWDDSALSSTPSILIAG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagatgatatctggttagatatgccagagagtaagcaattgaataccgatagt
gatgatgtagaagccgcgcctgaactgcacattttatatcaagacgagcatctcgttgct
atccacaaacctgcgggattgctggtacatcgcagttatttggcacgccgtgaacgtttt
tttgcgatgcaattaacacgcgatctggtggggtgtcatgtgtttccggtacatcgttta
gatagaccgacctctggcgtgttgttatttgccaaaaatagtgaagtggctaacgcgctt
tgcgaacaatttgccgaccatagtatcgaaaaacagtacctagcgttggtgcgtggcaat
atgcacgagagtggtgtattggattatgcgctcaaggttgaattggatgaagtggcggat
aagttctcaaatcaagataaagcagcccaagaagcggtgactcaatatgaaccgctactc
aatgctgaaatcccctatccgtcaggacgttatgcaacgagtcgatttgctttagttaaa
ctgagtcctaaaacggggcgcaagcatcaactaagacgccatatggcgcacttacgtcat
ccgattattggtgataccacccatggtgatggtaagcaaaatgcattttttagaacccat
tttgacatcaatcgactatggttgattgcgaaaaaattaaccttcactcacccgataacc
catgagcgcttaagcattgaaacagagcttgagccagaatgggaaaccgtttttgctcgc
ctaggttgggatgatagcgcattatcttccacacccagcatattgattgcgggttaa
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