Streptomyces xanthophaeus: KPP03845_107441
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Entry
KPP03845_107441 CDS
T08962
Symbol
icaR
Name
(GenBank) Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
sxt
Streptomyces xanthophaeus
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sxt03000
]
KPP03845_107441 (icaR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sxt01504
]
KPP03845_107441 (icaR)
Transcription factors [BR:
sxt03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
KPP03845_107441 (icaR)
Antimicrobial resistance genes [BR:
sxt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
KPP03845_107441 (icaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_41
HTH_7
TnsD
LacI
Sf6_terminase
HTH_11
HTH_20
HTH_40
CorA
UPF0122
HTH_Tnp_1_2
TetR
HTH_22
Motif
Other DBs
NCBI-ProteinID:
WCD91012
LinkDB
All DBs
Position
complement(8174059..8174667)
Genome browser
AA seq
202 aa
AA seq
DB search
MDSRSARKHEAILEAATSVFLDKGYSGTSMDDIAKRAAVSKQTVYKHFSDKEKLFAEIVL
ATTDRLDTTIDLLADIPTDAANLEESLTQLARQFLTTLTHPQVIQLRRLIIANADVFPDL
GTEWYERGFQRGLATLAATFQRLADQGLLRIDDALLAANHFSGLLLWIPVNKAMFTGSAQ
HTDADLDHYAAEGVRVFLAAYR
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggacagccgttcagcgcgcaagcacgaggcgatcctggaggccgcgaccagcgttttc
ctggacaaggggtactccgggacgagcatggacgacatcgcgaagcgggccgcggtgtcc
aaacagaccgtctacaagcacttctccgacaaggagaagctgttcgccgaaatcgtccta
gccaccaccgaccgcctcgacaccaccatcgacctgctggccgacatcccgaccgacgcc
gccaacctggaagagagcctcacccagctcgcccgccagttcctgacgaccctcacccac
cctcaggtcatccagctgcggcgcctgatcatcgccaacgccgacgtcttccccgacctc
ggaaccgagtggtacgagcggggcttccagcgagggctcgccaccctggcggcgaccttc
cagcgcctggccgaccagggactgctccgcatcgacgacgcgctcctggccgcgaaccac
ttctccggcctgctcctgtggatcccggtgaacaaggccatgttcaccggcagcgcccag
cacaccgacgccgacctcgaccactacgccgccgaaggcgtgcgcgtcttcctcgccgcc
taccgctga
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