Sphingobium yanoikuyae: A6768_14200
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Entry
A6768_14200 CDS
T05170
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sya03016
]
A6768_14200
Enzymes [BR:
sya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
A6768_14200
Transfer RNA biogenesis [BR:
sya03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
A6768_14200
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ATI81014
UniProt:
A0A291N0S4
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All DBs
Position
3096387..3096944
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AA seq
185 aa
AA seq
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MHRLFVAIRPPATIRSQLLTQMAGVPGARWQDDDQLHLTLRFIGQVDRHQADDIADALAG
VRFQPFAITLAGTGYFDRRGVVDTLWAGVQPRDPLAHLHAKVDRACTSTGIAPEARAYLP
HITLARFSRHGGDIAPFLALHAGLASRAFTVDEFSLYESRLGHAGSSYHTVETYRADGHP
GARDD
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcctgttcgtcgccatccgtccgcctgccacgatccgcagccagcttctgacc
cagatggccggcgttcccggcgcgcgttggcaggatgatgaccagttgcacctgaccctg
cgcttcatcgggcaagtggatcgccatcaggcagatgatatcgccgatgcgctcgccggc
gtccgcttccagccattcgccatcacgctcgccggcaccggctatttcgatcggcgcggc
gtggtcgacaccttatgggccggggtacagccgcgcgatccgctcgcccatcttcatgcc
aaggtggatcgcgcctgcacatcgaccggcatcgcgcccgaagcccgcgcctatctgccg
cacatcaccctcgcccgcttcagccggcacggcggcgatatcgcgcccttcctggcgctg
cacgccggcctcgcatcgcgcgccttcaccgtggacgaattcagcctctatgaaagccgg
ctcggccatgccggctccagctatcatacggtcgaaacctatcgcgcagacggtcatccc
ggcgcccgcgacgattga
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