Sphingobium sp. YBL2: TZ53_03085
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Entry
TZ53_03085 CDS
T03855
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TZ53_03085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_03085
Enzymes [BR:
syb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
TZ53_03085
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TZ53_03085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
RPA_interact_N
Motif
Other DBs
NCBI-ProteinID:
AJR22901
UniProt:
A0A0C5XDX3
LinkDB
All DBs
Position
complement(636186..636446)
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AA seq
86 aa
AA seq
DB search
MAQDSMTHEGDPSQMSFEDALRALESIVRRLESGDVPLDESISLYSQGEELRKRCMERLQ
AAEARIAKLTIDAGGAVTGAQPFGSD
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagacagcatgacccatgagggcgatccgtcgcagatgtcgttcgaagatgcg
ctgcgcgcgctcgaatcgatcgtccggcggctggagagcggggatgtgccgctcgacgaa
tccatttcgctctattcgcagggcgaggaactgcggaaacgctgcatggaacggctgcag
gcggccgaagcgcgcatcgccaagctgacgatcgacgccggcggcgccgtgaccggcgct
cagcccttcggttcggactga
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