Sphingobium sp. YBL2: TZ53_04535
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Entry
TZ53_04535 CDS
T03855
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03030
DNA replication
syb03430
Mismatch repair
syb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TZ53_04535
03430 Mismatch repair
TZ53_04535
03440 Homologous recombination
TZ53_04535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syb03032
]
TZ53_04535
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_04535
Enzymes [BR:
syb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TZ53_04535
DNA replication proteins [BR:
syb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TZ53_04535
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TZ53_04535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJR23142
UniProt:
A0A0C5XKI5
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All DBs
Position
948816..949508
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AA seq
230 aa
AA seq
DB search
MREIIFDTETTGFDPASGDRLVEIGCIELLNRVPTGRTFHAYYNPQRSMPAAAEAVHGLS
DAFLKDKPLFSHGVEELLAFLEDSHLVAHNARFDFGFLNHELKLCKLPEVSMERMIDTVA
IARQLHPGAKHSLDALCTRYGIDRSHRIKHGALLDAELLAQLYIELTGGRQIGLGLAQEE
EKLVVNMELAAEVAVRPVRPARVFAAGAEELERHAAFVATLDKPLWLEEA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcattttcgacaccgaaacgacgggattcgacccagcctccggcgatcgc
ctggtcgagatcggatgcatcgaactcctcaaccgggttcccacgggccgcaccttccac
gcttattacaatccgcagcggtcgatgccggccgcggccgaggcggtgcacggcctgtcc
gacgcttttctgaaggacaagccgctattttcccatggggtggaggaactgctcgccttt
ctggaggacagccatctggtcgcccataatgcgcgcttcgacttcggcttcctcaatcac
gaactgaagctgtgcaagctgcctgaagtgtcgatggagcggatgatcgacaccgtcgcc
atcgcccggcagcttcaccccggcgccaagcacagcctcgacgcgctctgcacccgctac
ggcatcgaccgcagccatcgcatcaagcatggcgcgctgctcgacgccgaattgctggcc
cagctttacatcgaactgaccggcggccgtcagatcggcctcggtcttgcacaggaggaa
gagaaactcgttgtaaatatggaacttgcggcggaagtcgcggttcgccctgttcgtccc
gcgcgtgtctttgcggcaggcgcggaggagctggagcggcatgcagcgttcgtcgcgacg
ctggacaagccgctctggcttgaggaggcctga
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