Sphingobium sp. YBL2: TZ53_04685
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Entry
TZ53_04685 CDS
T03855
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00550
Peptidoglycan biosynthesis
syb01100
Metabolic pathways
syb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TZ53_04685
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TZ53_04685
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
syb01003
]
TZ53_04685
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syb01011
]
TZ53_04685
Enzymes [BR:
syb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
TZ53_04685
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TZ53_04685
Glycosyltransferases [BR:
syb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
TZ53_04685
Peptidoglycan biosynthesis and degradation proteins [BR:
syb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
TZ53_04685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AJR23166
UniProt:
A0A0C5XEL3
LinkDB
All DBs
Position
975629..977704
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AA seq
691 aa
AA seq
DB search
MARSGKSSEPRGKLKTWLVRGLKIGLVGGLSALVAIVVAVVIAYQSLPDYESLKSSPNGQ
MIRVHAADGSVIVSLGPSFGRWLSYDQIPTVMVDAMVSTEDKRYYLHPGVDPIGMARAAW
VALERRGSGRRWQGASTITQQVTRNIFLNNSYSWGRKVREMVLALALERKFSKRQILELY
LNKVYFGGGAYGIDAASRKFFGHPATSLDLPEAAIVAGLVKAPSSYSPTADADAAIGRAG
VVLELMEENGKISAAERASAGLQNVRMAPEPPQNSVRYFTDWALPQLDTLIDEPNEPLEV
YTTIDLNMQKAATAAIQANVPSGTQGALVSLDRDGAVRAMVGGLDYVSSNYNRATTATRQ
PGSAWKIFVYMAALEAGYTPDTGVTDSPVDINGWKPRNSNGRFSGDIDIRTAFAYSVNTV
AAKLGVEVGFPTVADMARRFGITTPINTHPSMVLGTSDVRLIDMTRAFASIARKGVAVTP
YGITRVTTAEGRLLYEHQDDTSRVLVAPWVAAGMTDLMQTAVSTGTGRAAQIGRPVAGKT
GTTSSNKDGWFLGFSSGITTGVWMGRDDARAVGVLQGGRAPAHAFADYMKVAVAKRPVEQ
FETQVTLPEWQLEPDEEAYYGQPDGGTDSGMMVDENGLPIERAQQPPEDEEQPDDSGQAA
PNPADRPQPPRLDQQWIDNVLGRNRQQPAPH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcacgatcaggcaagagcagcgaaccgcggggcaaattgaagacatggctggtgcgg
ggcctgaagatcggcctcgtcggcggcctcagcgcgcttgtcgcgatcgtcgtggcggtg
gtgatcgcctatcagtctctgcccgactatgaatcgctgaagtcctcgcccaacggccag
atgatccgcgtccatgccgccgacggcagcgtcatcgtatcgctgggccccagcttcggc
cgctggctgagctacgaccagattccgaccgtgatggtcgatgcgatggtttcgaccgag
gacaagcgttactatctgcaccccggcgtcgatcccatcggcatggcgcgcgccgcctgg
gtggcgctggagcggcgcggcagcggccgccgctggcagggcgcgtccaccatcacccag
caggtgacgcgcaacatcttcctcaacaacagctacagctggggccgcaaggtgcgcgaa
atggtgctggccctcgcgctggagcgcaaattctccaagcggcagatcctggagctttat
ctcaacaaggtctatttcggcggcggcgcctatggcatcgacgcggccagccgcaaattc
ttcggccacccggccaccagcctggatctgcccgaagcggcgatcgtcgccggcctggtg
aaggcgccctccagctattccccgaccgccgacgccgatgccgccatcggccgcgcgggc
gtggtgctggaactgatggaggaaaatggcaagatcagcgcggcggaacgcgcttcggcc
ggtctccagaatgtaaggatggcgcccgaaccgccgcagaacagcgtccgctacttcacc
gactgggcgctgccgcagctcgacacgctgatcgatgagcccaatgagccgctggaggtc
tacaccaccatcgacctcaacatgcagaaggcggccaccgcggcgatccaggccaatgtg
cccagcggcacgcagggcgcgctggtttcgctcgaccgcgacggcgcggtgcgggcgatg
gtcggcgggctggactatgtgagctccaactataatcgcgcgacgactgcgacgcggcag
ccgggttcggcctggaagatcttcgtctacatggcggcgctggaggcgggctatacgccc
gacaccggcgtcaccgacagtccggtcgacatcaacgggtggaagccgcgcaacagcaat
ggccgcttttccggcgacatcgatatccgcaccgccttcgcctattcggtcaacaccgtg
gcggcgaagctgggcgtggaggtcggcttccccaccgtggcggacatggcgcgccgcttc
ggcatcaccacgccgatcaacacccatccctcgatggtgctgggcacgtccgatgtgcgc
ctgatcgacatgacgcgcgccttcgcctccatcgcgcgcaagggcgtggccgtgactccc
tatggcatcacccgggtgacgaccgccgaaggccgcctgctctacgaacatcaggacgac
accagccgggtgctggtcgccccctgggtcgcggcggggatgaccgacctgatgcagacc
gccgtcagcaccggcaccggcagggccgcgcagatcggccgccccgtcgccggcaagacc
ggcaccaccagcagcaacaaggacggctggttcctgggcttttccagcggcatcaccacc
ggcgtctggatgggccgcgacgacgcccgcgccgtgggcgtcctccagggcggccgggcg
ccggcccatgcctttgccgactatatgaaggtcgccgtcgcgaaacgcccggtcgaacag
ttcgaaacgcaggtgacgctgcccgaatggcagctcgaaccggatgaggaggcctattat
ggtcagcccgacggcggcacggacagcggcatgatggtcgatgaaaacggccttcccata
gaacgggcgcagcagccgccggaggatgaggaacagccggacgatagcgggcaggcggcg
cccaatcccgccgaccggccgcagccgccgcgtctggaccagcaatggatcgacaatgtg
ctgggccgcaatcggcagcagccggcgccacattag
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