Synechococcus elongatus PCC6301: syc1111_c
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Entry
syc1111_c CDS
T00163
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
syc
Synechococcus elongatus PCC6301
Pathway
syc03030
DNA replication
syc03430
Mismatch repair
syc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
syc1111_c (holA)
03430 Mismatch repair
syc1111_c (holA)
03440 Homologous recombination
syc1111_c (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syc03032
]
syc1111_c (holA)
03400 DNA repair and recombination proteins [BR:
syc03400
]
syc1111_c (holA)
Enzymes [BR:
syc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
syc1111_c (holA)
DNA replication proteins [BR:
syc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
syc1111_c (holA)
DNA repair and recombination proteins [BR:
syc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
syc1111_c (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
ROQ_II
Motif
Other DBs
NCBI-ProteinID:
BAD79301
CyanoBase:
syc1111_c
UniProt:
A0A0H3K8J0
LinkDB
All DBs
Position
complement(1221012..1222010)
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AA seq
332 aa
AA seq
DB search
MPVYYFWGEDEFALRQAVEKLRDRSVDPMWASFNSERIPPEQADGVLVALSLALTPPFGA
GQRFIWLPETPLAQQCSDAVYAELTRTLPQMPETTVLLFSSTGKPNGRLKSTKLLQKVAE
LKEFSPIPPWRGEALEQQVVQVAHEVGVRLDREAVACLAAAVGNQTRQLYSELEKLKLFQ
GDRSEPVTARIVQALVSTTTQNSLQLAAAIRQGDCDRALSLVSDLIASNEPALRISATLI
GQFRMWLWVKLLQERGERDPQAIATAAGIGNPKRVHFVLQEVRSLTSRQLQQTLPLLLDL
EFGLKQGADPLGHLQSQVIALCQCCQPPRSRL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttactacttttggggagaagatgaattcgccctgcgacaagcggtggaaaag
ttgcgcgatcgcagcgtagatccaatgtgggcgagttttaacagcgagcggattccccca
gaacaagcagatggggtgctggttgctctgtcgctagcactaacgccaccctttggggcg
gggcaacgcttcatctggctgccggaaacgcccttggcccagcaatgttccgatgcggtc
tatgccgagctgactcgcaccttgccccaaatgcccgagacaacggtgttgctgttcagc
agtacgggtaagccaaatggccgactgaaatccactaagctactgcaaaaagttgcggaa
ctgaaggagttctcccccattcctccttggcgcggtgaggcgctcgagcaacaggttgtc
caagttgcccatgaggtcggcgtccgtttagatcgcgaggcagtggcttgtttggcggca
gcggtgggcaatcaaacccgccagctctacagcgaactggaaaagctgaaactcttccaa
ggcgatcgctcagagccagtgacagcccgcatagtccaagccctagtcagcacaacgact
caaaacagcttgcaactggcagctgccattcgccaaggggactgcgatcgcgcccttagc
ttggtcagtgacttgatcgctagcaacgaaccagcgctgcggatcagtgccacgctgatt
ggtcaattccgcatgtggctctgggtcaaactgctgcaggagcggggagaacgagatccg
caagcgatcgccacggcagcgggaattggaaatcccaagcgtgtccattttgttttgcaa
gaagtgcgatcgctcaccagtcgtcagctacagcaaaccttgcccctcttgctcgacctc
gaatttgggctcaagcagggagcggatccgcttgggcatttacaatcccaagtgattgcc
ctttgccaatgctgccaacccccgcgatcgcgtctgtag
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