Synechococcus sp. CC9605: Syncc9605_1960
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Entry
Syncc9605_1960 CDS
T00292
Name
(GenBank) putative ABC transporter, oligopeptides
KO
K02033
peptide/nickel transport system permease protein
Organism
syd
Synechococcus sp. CC9605
Pathway
syd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Syncc9605_1960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syd02000
]
Syncc9605_1960
Transporters [BR:
syd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Syncc9605_1960
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
ABB35701
CyanoBase:
Syncc9605_1960
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All DBs
Position
1777881..1778900
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AA seq
339 aa
AA seq
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MGRARDLSRYSATRLALAPLMLWLIASLVFLLLRVAPGDPVDAVLGSRAPAAAKAAMRAR
LGLDQSLLDQYLSYLNGLIHGDLGQALINQEPVRTIIGKTLPASLELSVIALAVAAVVGL
SIGFSGIARPEGKIDLGGRLYGLGTYALPPFWVAMLVQLVFAVSLSWLPVGGRFPPSILP
PEGSGFFLLDSALQNNWAAFRGTVRHLILPAGTLALLLSGTFTTALRLNLRRTLRGDHVE
AARSRGLSERQVILRHGLPNALLPVLTIAGITVASLIGGALLIEVTFSWPGIALRLQEAI
NQRDYPVVQGIVVVIAALVVLVSVAVDLLVAALDPRVRY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcgcccgagacctctcccgctacagcgccacccgcctcgccctggcgccattg
atgttgtggctgatcgccagcctggtgttcctgttgctgcgcgtcgccccaggggatccc
gtggatgcggtgctcggcagccgggctcccgctgccgccaaagccgccatgcgggctcgg
ctgggcctggatcaatcgttgctggatcagtacctcagctatctcaacggattgatccat
ggcgacctagggcaagccctgatcaaccaggagccggttcgaaccatcatcggcaaaacc
ctgcccgccagcctggaactgagcgtcatcgccctggctgtcgctgctgtggtggggctg
agcattggattcagcggaatcgcccggcccgagggaaagattgacctgggaggtcgcctc
tatggattgggcacctatgccctgccgcccttctgggtggccatgctggtgcagctggtg
ttcgccgtcagcctgagctggttgccggtgggtggacgcttcccccccagcattctcccc
cccgagggcagcggatttttcctgctggacagcgctctgcagaacaactgggccgccttc
cgaggcactgtgcgtcacctgatcctgcccgcaggaaccctggccctgctgctcagcggc
accttcacaaccgctctgcgcctgaacctgcgacgcaccctgcgcggcgaccacgtggaa
gcggcccgcagccgcggcctgagtgagcgtcaggtgatccttcgccacggactgcccaat
gccttgctgccggtgctcaccatcgctggcatcaccgtggcctcgttgattggtggggcc
ttactgattgaagtgaccttttcctggccaggcattgccctgcgccttcaggaagccatc
aaccagagggactaccccgtcgttcaggggatcgtggtggtgatcgcagccttggtggtg
cttgtgagtgttgccgttgacctgctggtggccgccctcgatcctcgggtgcgttactga
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