Synechococcus elongatus PCC7942: Synpcc7942_0086
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Entry
Synpcc7942_0086 CDS
T00300
Name
(GenBank) isoamylase, glycosyl hydrolase family 13
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
syf
Synechococcus elongatus PCC7942
Pathway
syf00500
Starch and sucrose metabolism
syf01100
Metabolic pathways
syf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
syf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Synpcc7942_0086
Enzymes [BR:
syf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Synpcc7942_0086
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
ABB56118
CyanoBase:
Synpcc7942_0086
UniProt:
Q31S51
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Position
complement(82871..84955)
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AA seq
694 aa
AA seq
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MTVSSRRPESTVAVDPGQSYPLGATVYPTGVNFSLYTKYATGVELLLFDDPEGAQPQRTV
RLDPHLNRTSFYWHVFIPGIRSGQVYAYRVFGPYAPDRGLCFNPNKVLLDPYARGVVGWQ
HYSREAAIKPSNNCVQALRSVVVDPSDYDWEGDRHPRTPYARTVIYELHVGGFTKHPNSG
VAPEKRGTYAGLIEKIPYLQSLGVTAVELLPVHQFDRQDAPLGRENYWGYSTMAFFAPHA
AYSSRHDPLGPVDEFRDLVKALHQAGIEVILDVVFNHTAEGNEDGPTLSFKGLANSTYYL
LDEQAGYRNYTGCGNTVKANNSIVRSLILDCLRYWVSEMHVDGFRFDLASVLSRDANGNP
LSDPPLLWAIDSDPVLAGTKLIAEAWDAAGLYQVGTFIGDRFGTWNGPFRDDIRRFWRGD
QGCTYALSQRLLGSPDVYSTDQWYAGRTINFITCHDGFTLRDLVSYSQKHNFANGENNRD
GTNDNYSWNYGIEGETDDPTILSLRERQQRNLLATLFLAQGTPMLTMGDEVKRSQQGNNN
AYCQDNEISWFDWSLCDRHADFLVFSRRLIELSQSLVMFQQNELLQNEPHPRRPYAIWHG
VKLKQPDWALWSHSLAVSLCHPRQQEWLYLAFNAYWEDLRFQLPRPPRGRVWYRLLDTSL
PNLEACHLPDEAKPCLRRDYIVPARSLLLLMARA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgactgtttcatcccgtcgccctgaatcgaccgtggctgttgaccccggccaaagctat
cccctcggggcaaccgtctatcccaccggcgtcaacttctcgctctacaccaagtacgcg
acgggcgttgaattactgctgtttgatgaccctgagggtgcccagcctcaacggacagtg
cgcctcgatccgcacctcaatcgcacctctttctactggcatgtttttattccgggcatt
cgctccggtcaggtttatgcttaccgcgtctttggcccctacgcacctgatcgcggcctc
tgttttaaccccaacaaagtgctgctggatccctacgctcgcggggttgtcggctggcag
cactacagtcgcgaagcggctattaaacccagtaataactgcgttcaagccctgcgtagc
gtggttgttgaccccagcgactacgactgggaaggcgatcgccatccacgcacaccctac
gctcgcacagtaatctatgagctgcatgttggcggcttcaccaagcatcccaattccggc
gtcgcccctgaaaaacgtggcacctacgctggtctaatcgaaaaaattccctacctgcaa
tccctcggcgtcacggccgttgagttgctgccggtgcaccagttcgatcgccaagatgcc
cccttaggacgcgagaactactggggctacagcaccatggctttttttgcgccccacgca
gcctacagctctcgccatgatccacttggtccagttgatgagttccgcgacctcgtcaag
gcgctccaccaagcagggattgaggtgattctcgacgtggtgttcaaccacactgctgaa
gggaatgaagacggtccaacgctgtctttcaaaggtctagcgaattcaacctactatctg
ctggatgaacaggcgggctatcgcaactacaccggctgcggcaacaccgtcaaagctaac
aattcgatcgtgcgatcgctgattctcgattgcctgcgttattgggtctcggaaatgcac
gtcgatggcttccgctttgaccttgcgtcggtgctgagtcgtgatgccaatggcaacccc
ctatcggatccgcccttgctttgggcgattgattccgatccggttttggccggtacgaag
ctcattgctgaagcttgggacgcagccggcttatatcaggttggtacctttattggcgat
cgctttgggacttggaacggtcccttccgggacgatattcggcgtttttggcgtggagat
cagggctgtacttacgccctcagtcaacgcctgctgggtagccccgatgtctacagcaca
gaccaatggtatgccggacgcaccattaacttcatcacctgccatgacggctttacgctg
cgagatctagtcagctatagccagaagcacaactttgccaatggagagaacaatcgggac
gggaccaatgacaactacagctggaactacggcattgaaggcgagaccgatgaccccacg
attctgagcttacgggaacggcagcagcgcaatttgctcgccacgttattcctcgcccag
ggcacaccgatgctgacgatgggcgatgaggtcaaacgcagtcagcagggtaacaataac
gcctactgccaagacaatgagatcagctggtttgattggtcgctgtgcgatcgccatgcc
gatttcttggtgttcagtcgccgcctgattgaactttcccagtcgctggtgatgttccaa
cagaacgaactgctgcagaacgaaccccatccgcgtcgtccctatgccatctggcatggc
gtcaaactcaaacaacccgattgggcgctgtggtcccacagtctggccgtcagtctctgc
catcctcgccagcaggaatggctttacctagcctttaatgcttactgggaagacctgcgc
ttccagttgccgaggcctcctcgcggccgcgtttggtatcgcttgctcgatacttcactg
ccgaatcttgaagcttgtcatctgccggatgaggcaaaaccctgcctacggcgcgattac
atcgtcccagcgcgatcgctcttactgttgatggctcgtgcttaa
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