Synechococcus elongatus PCC7942: Synpcc7942_1050
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Entry
Synpcc7942_1050 CDS
T00300
Name
(GenBank) phycobilisome rod linker polypeptide
KO
K02286
phycocyanin-associated rod linker protein
Organism
syf
Synechococcus elongatus PCC7942
Pathway
syf00196
Photosynthesis - antenna proteins
syf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syf00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Synpcc7942_1050
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syf00194
]
Synpcc7942_1050
Photosynthesis proteins [BR:
syf00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
Synpcc7942_1050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
CpcD
Motif
Other DBs
NCBI-ProteinID:
ABB57080
CyanoBase:
Synpcc7942_1050
UniProt:
Q31PD9
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All DBs
Position
1062357..1063226
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AA seq
289 aa
AA seq
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MAITVASSRLGTAPFSNAAPVELRPDGDRDQVQAVIRAVYRQVLGNDYIMKSERLTAAES
LLVNGSISVRDFVRAVAKSELYKTKFFYNNFQTRVIELHCKHLLGRAPYSEAEVIEHLDR
YETQGYDADVDSYIDSSEYLETFGESIVPYYRDIEYHVGQQSVGLPRLFSLYRGYATSDR
TSLGGNNSRLAANLAAKSVAPVVAPSVGTNYVASTKGEAPMRALGGSTPFGQTASRIFRV
EIAAISKPGFPSVRRSNRSLLVPYEQLNNTLQQVNRSGGRVVSVAPASL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcaattactgttgcatcctctcgtctcggaacagcaccgttcagcaatgctgcaccg
gttgagctgcgtcctgatggcgatcgcgaccaagtacaagcggtaatccgcgcggtttac
cgccaagtgcttggcaacgactacatcatgaagtcggagcgcttgacggccgctgaatcc
ttgctggtcaatggctcgatttccgtgcgcgactttgtccgtgctgtggctaagtcagag
ttgtacaagaccaagttcttctacaacaacttccaaacccgtgtcattgagttgcactgc
aaacatctgttgggtcgtgcaccctatagcgaggccgaagtgatcgagcacctcgatcgc
tacgaaacccaaggctacgacgcagatgtcgactcctacatcgattcttcggagtacttg
gaaaccttcggcgaaagcatcgttccctactaccgagacattgagtaccacgtcggtcag
cagagcgtcggtctgccgcgcctgttctcgctctaccggggctatgctacgagcgatcgc
acctccttgggcggtaacaattctcgcctagcggcaaacttggcggccaaatccgtggca
ccggtcgtggcccccagcgttggcaccaactacgttgcttcgaccaagggtgaagccccg
atgcgggccttgggtggctcgacgccctttggccaaacggccagccggatcttccgcgtt
gaaatcgcggcgattagcaaaccgggcttccccagcgtgcgccgcagtaatcgctcgctc
ctggtgccctacgagcaactgaacaacaccttgcaacaggtcaaccgcagcggcggtcgt
gttgtcagcgtggcgccggctagcctctag
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