Synechococcus sp. CC9311: sync_0001
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Entry
sync_0001 CDS
T00390
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
syg
Synechococcus sp. CC9311
Pathway
syg03030
DNA replication
syg03430
Mismatch repair
syg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
sync_0001 (dnaN)
03430 Mismatch repair
sync_0001 (dnaN)
03440 Homologous recombination
sync_0001 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syg03032
]
sync_0001 (dnaN)
03400 DNA repair and recombination proteins [BR:
syg03400
]
sync_0001 (dnaN)
Enzymes [BR:
syg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
sync_0001 (dnaN)
DNA replication proteins [BR:
syg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
sync_0001 (dnaN)
DNA repair and recombination proteins [BR:
syg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
sync_0001 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
ABI45873
CyanoBase:
sync_0001
UniProt:
Q0IE82
LinkDB
All DBs
Position
174..1331
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AA seq
385 aa
AA seq
DB search
MKLVCSQAELNAALQLVSRAVASRPTHPVLANVLLTADAGTDRLSLTGFDLNLGIQTSLA
ASVDTSGAVTLPARLLGEIVSKLSSDSPVSLSSDAGADQVELTSSSGSYQMRGMPADDFP
ELPLVENGTALRVDPASLLKALRATLFASSGDEAKQLLTGVHLRFNQKRLEAASTDGHRL
AMLTVEDALQAEISAEESEPDELAVTLPARSLREVERLMASWKGGDPVSLFCERGQVVVL
AADQMVTSRTLEGTYPNYRQLIPDGFSRTIDLDRRAFISALERIAVLADQHNNVVRIATE
PATGLVQISADAQDVGSGSESLPAEINGDAVQIAFNARYVLDGLKAMDCDRVRLSCNAPT
TPAILTPANDDPGLTYLVMPVQIRT
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggtctgttcccaggcagaactcaacgcagctctgcagttggtcagtcgggct
gtcgcctcacgtccaacccatccggtgttggccaatgtgttgcttaccgctgatgcaggc
actgatcgtctcagcctcacaggatttgatctgaatttgggcattcagacgtcactagct
gcttctgtcgacaccagtggtgcggtgactctgcccgctcgcttgcttggtgaaatcgtc
tccaagttgtccagtgattcgccggtgtcgttgtccagtgatgcgggcgctgaccaggtc
gagctcaccagctccagcggtagctatcagatgcgtggaatgcctgctgacgatttcccc
gagctcccgctcgtggagaacggcacagctctacgggtggatcccgcatcactgctgaaa
gccttgcgtgcaaccttgttcgcaagcagtggtgatgaagccaaacagctcctcacaggc
gtgcatctgcgcttcaatcagaaacgtttggaggccgcatccaccgacgggcatcggctt
gccatgttgacggttgaggatgccttgcaggccgagatcagtgctgaagagtctgagcct
gatgaattggccgtcacgctgccagcacgctccctgcgtgaggtggagcgattaatggcg
agctggaaaggaggcgatccggtcagcctgttttgtgagcgaggtcaggttgtcgtgctc
gcggccgatcagatggtgaccagccgcaccctggaaggcacctatcccaattaccgccag
ctgattcctgatggttttagccgcacgattgatctcgatcgacgggcttttatttctgct
ttggaacggatcgctgtcttggctgaccaacacaacaatgtggtccggatcgcgactgag
ccagccacggggttggttcagatcagtgctgatgcccaagatgtgggtagtggttctgag
tctttacctgccgagatcaacggcgatgctgtacaaattgccttcaatgcgcggtacgtg
ctggatggcctcaaggccatggattgtgatcgcgtcaggttgtcatgcaatgccccaacg
acgccggcgatcttgacccctgccaatgatgatcctggcctcacctacctggtaatgcct
gttcagatccgtacctga
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