Synechococcus sp. WH 8109: Syncc8109_2226
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Entry
Syncc8109_2226 CDS
T03783
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syh03016
]
Syncc8109_2226
Enzymes [BR:
syh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Syncc8109_2226
Transfer RNA biogenesis [BR:
syh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Syncc8109_2226
Prokaryotic type
Syncc8109_2226
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AHF64553
UniProt:
W0GZW7
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All DBs
Position
1669527..1670486
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AA seq
319 aa
AA seq
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MQVTFLGTSSGVPTRARNVSAVALRLPQRSEMWLFDCGEGTQHQFLRSDLRLSQLRRVFI
THMHGDHVFGLPGLLASLGLAGSSSAGVDLYGPDPLESYLNGVLRTSSTRIGYPLAIHRV
RDAAEQSTLLFEDDDFTVRCTPLTHRVPAYAYRIEQKPLAGRFDIEKARELNIPPGPVYA
QLKRGETVTLEDGRSIDGTSLCGEERPGVSVVYCTDTVFCEAAVELARGADLLIHESTFA
HGEAEMAFQKQHSTSTMAAQTAAEAGVGQLVLTHLSPRYVPGNPVTPQDLLDEAKAIFPN
TLLAKDFLSIDVKPRCNSS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggtcacatttctcggtacgagttctggggtacccacccgggcccgcaacgtttca
gccgtggctctgcgcttgccgcagcgctcggagatgtggctgttcgactgcggcgagggc
acccaacatcagtttttacgcagtgatctgcggctatcgcagctgcgccgggtgttcatc
acccacatgcatggcgaccacgtgttcggcctgcctggtctgctcgccagcctcgggctc
gccggcagcagctccgcaggggtggatctctacgggccggacccgctggagagttacctc
aatggtgtgctgcgcaccagctccacccgtatcggctaccccctcgctatccacagggtc
cgggatgcagccgagcagagcacgctgctgttcgaggacgacgacttcacggtgcgctgc
accccgctcacccaccgtgtgccggcctacgcctatcgcatcgaacagaagcctctggcc
ggtcgcttcgatattgagaaagcacgggaactgaacatcccgcccgggcccgtgtacgcc
cagttaaagcgaggtgaaacggtgaccctggaggacggtcgcagcatcgacggcaccagc
ctctgcggtgaggaacggcccggtgtgagcgtcgtctattgcaccgacaccgtgttctgc
gaagcggcggtcgagcttgcgcgcggcgcggatctgctgattcatgaatccacctttgcc
catggcgaggcggagatggcgttccagaaacagcactccaccagcaccatggctgcccag
acagccgccgaagcgggtgtggggcagctggtgctcacccacctgagcccgcgctacgtg
ccgggcaacccggtcacgccccaagacctgttggacgaggccaaggcaatcttccccaac
acgctgctggccaaggacttcctcagcattgacgtcaaaccacgctgcaacagttcgtga
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