Synechococcus sp. WH 8109: Syncc8109_2584
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Entry
Syncc8109_2584 CDS
T03783
Symbol
clpB
Name
(GenBank) ATPase
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
syh03110
]
Syncc8109_2584 (clpB)
Chaperones and folding catalysts [BR:
syh03110
]
Heat shock proteins
HSP100
Syncc8109_2584 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_22
Sigma54_activat
Clp_N
nSTAND3
AAA_16
Mg_chelatase
IstB_IS21
RuvB_N
AAA_18
AAA_7
AAA_14
ABC_tran
TniB
Zeta_toxin
DNA_pol3_delta2
AAA_23
Sigma54_activ_2
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
AHF64891
UniProt:
W0H218
LinkDB
All DBs
Position
complement(1950470..1953235)
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AA seq
921 aa
AA seq
DB search
MNGSLTHEPDRFSDAAWDLLLSGQDVARRWRHEQLDVEHLIQVLFTDPACRHLVERLPLP
IDALLDRLEDVLADQPSGRGDELFIGDDLEQLLDSADAIRRRWNGDVIDLPEVLMAIGAD
PRIGADLFAGFGLSADALEQLIQRGMDPRVAGASVPPQERSVPRSQQEVQQEAPRRERVA
RVPSSSRAQRESEPVAPVAPVTPQSFAPEAPSQEPPAALEAYGRDLTEEAEAGSLDPVIG
RDSEIRNLIKVLSRRSKNNPVLIGEPGVGKTAIAELLAQRIVAGEVPESLQGLRLVALDL
GALIAGAKFRGQFEERLRSVLEEVSGSDSGVVLFIDELHTVVGSDRSSTDAGSLLKPALA
RGDLRCIGATTPEDYRLTVEKDPALNRRFQQVVIREPDLELSLEILRGLKERYELHHGVS
ITDEAIQTANRLADRYISDRCLPDKAIDLIDEAAAQLKMEVTSKPQVVEEAEADLRRVEL
ALLAAEQAPEAERIQLQRNRLEVSTRLDDLRRRWQEERGQLEELGQLLQQDEDLRHAIAE
AERDGDLEEAARLQYDQLHRVQQRRDELEASKAEAQSAGTALLREQVEAGDIADLVARWT
GIPVQRLLAGERRKLLDLDAHLAERVIGQGEAVSAVAAAIRRARAGMKDSRRPVGSFLFL
GPTGVGKTELAKALAGSLFDEEEALVRLDMSEFMERNAVARLIGAPPGYVGYEEGGQLTE
AVRRRPYAVLLLDEVEKAHPDVFNLLLQVLDDGRLTDSQGRTVDFRHTVVVMTSNLASPA
ILEHARSGSMDESALQQQVDAALSSQFRPEFLNRIDEVIRFRPLEVSDLVRIVQLQLKDL
AALLAEQGLALLVDDAVAEAMARQGYEPEYGARPLRRVLRRQLENPLSTLLLEERFAGAS
GVTVRLGEAGTDALVFDPVGV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
ttgaacggcagcctcacccatgagccggatcgcttcagcgacgcggcctgggatctgctg
ctcagtggtcaggacgttgcccgtcgctggcgccatgagcagttggacgtggagcaccta
attcaggtgctgttcaccgatcccgcctgccgccacctggtggagcgcttgcccctcccc
atcgatgcgctcttggatcgcttggaggatgtgctggctgatcagccctctgggcgaggt
gatgagctcttcatcggtgatgatctggaacagctgctcgattcggctgatgccatccgc
cggcgctggaatggcgacgtcatcgatctgccggaagtgttgatggccattggcgccgat
ccgcggatcggcgctgatttgtttgccggctttggtttgtcggcagatgccctagagcag
ctgatccaacgcggcatggacccacgggttgctggggcttccgttccaccccaggagcgg
tcggtgccgcggtctcagcaggaggtgcagcaggaagcgccccgtcgtgaacgggtggcg
cgcgttccctcctcctcccgtgcgcagcgcgagtcagagcctgtcgcccctgtcgcccct
gtcaccccccagtcgttcgcccctgaggccccctcacaggagcctcccgcggccttggag
gcctatgggcgggatctcaccgaagaggcggaagcaggcagcctcgatccggtgatcggt
cgtgattctgaaattcgcaacctgatcaaggtgctctcgcgccggagcaagaacaatccg
gtgctcatcggtgaacccggtgtaggcaaaacagcgattgcggagctgctggcgcagcgg
atcgtggcgggtgaagtgccggagtcgctacagggtctgcggctggtggcgctggatctc
ggtgctttgatcgccggtgccaagttccggggtcagtttgaggaacgcctgcgctcggtg
ctcgaggaggtgagtggttccgattccggggtggtgttgttcatcgatgagctgcacaca
gttgttggcagtgatcgcagcagcacagatgccggcagcctgctgaaaccagccctggcc
cgaggcgatctgcgctgcatcggtgccactacgccggaggattaccggctcacggtggaa
aaggatccggcccttaaccgccgttttcagcaggtggtgatccgggagccggatctggag
ttgagcctcgaaattctgcgtggcttgaaggagcgctacgagctgcaccacggtgtcagc
atcaccgatgaggccattcagaccgccaaccgtctcgccgaccgctacatcagcgatcgc
tgcctgccggacaaagccattgatctgatcgatgaggcggcggcacaactgaagatggag
gtcacctccaagccgcaggtggtggaggaggccgaagcggatctacgccgcgttgaactg
gccttgctcgctgccgagcaggcgcctgaagcggagcggattcagctccagcgcaaccgg
cttgaagtgtccacgcgactggatgatctgcggcggcgctggcaggaggagcgcggtcag
ctcgaggagctcggccagttgctccagcaggacgaagacctgcgccatgccatcgctgag
gccgagcgggatggtgaccttgaagaagcggctcgcctccagtacgaccagctgcatcgg
gtgcagcagcgccgcgatgaattggaggcgtccaaggcggaggcccagtccgctggaacg
gccctgttgcgcgagcaggttgaggccggtgacatcgctgatctggtggcccgttggacc
ggaatccccgtgcagcggctgttggcgggcgagcggcgcaaactcctggatctcgacgcc
catctcgctgaacgggtcattggtcagggcgaggcggtgtcggccgttgctgctgccatc
cgccgggccagggccggcatgaaggattcccgtcgaccggtgggttccttcctgttcctg
gggccgaccggcgtcggcaagaccgagctagcgaaggcgctggcggggtcgttgtttgat
gaagaggaggcgctggttcgcctcgacatgagcgagttcatggagcgaaacgctgtggct
cggctgatcggtgctcctcccggttatgtcggctacgaggaaggggggcaactcacggag
gccgtgcgccgccggccctatgcggtgctgcttctcgatgaagtggagaaggcccatccc
gatgttttcaacctgctgctgcaggtgctggatgacggccggctcaccgattcccagggc
cgcactgttgatttccgccacaccgtggtcgtgatgaccagcaatctggcgagcccggcg
atccttgagcatgcccgctcgggatcaatggatgagtcagccctgcaacagcaggtggat
gcagcgctctccagccagttccggcctgaattcctcaaccggattgatgaggtgattcgt
ttccgtccgttggaagtctccgatctggtgcggattgttcagttgcagctgaaggacctc
gcggctctattggccgagcagggcttggccctgctcgtggatgacgctgtcgctgaggcc
atggcccgtcagggctatgaaccggagtacggggcgcggccgctgcgtcgggtcttgcgg
cgccaattggaaaatccgctctccaccctgctgcttgaggagcgctttgccggagctagt
ggcgtgacggtgcggctgggggaggccggcacggatgccctggtgttcgatccggtgggg
gtttga
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