Synechococcus sp. CB0101: CB0101_09055
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Entry
CB0101_09055 CDS
T06409
Name
(GenBank) RpoD/SigA family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
sync
Synechococcus sp. CB0101
Brite
KEGG Orthology (KO) [BR:
sync00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sync03021
]
CB0101_09055
Transcription machinery [BR:
sync03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CB0101_09055
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Rv2175c_wHTH
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QCH15057
UniProt:
A0A4P7ZUX4
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Position
1695074..1696063
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AA seq
329 aa
AA seq
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MVAAVDASGLSTDLVRSYLRDIGRVPLLSHEQEITLGRQVQELVALEELEQELEMRAGGS
KPDHEQLAKAAQLTPQQLKKRLRSGQRAKERMVAANLRLVVSVAKKYTKRNMELLDLIQE
GTIGLVRGVEKFDPTRGYKFSTYAYWWIRQGITRAIAEKSRTIRLPIHITETLNKLKKGQ
RELSQELGRTPTVTELAEFVELPEEEVKDLLCRARQPVSLETKVGDGDDTELLDLLAADG
TQPEELVDGECLRSDMRDLLEQLPDLQCRVLKMRYGIPCADVPDPDEPMSLTGIGRILGM
SRDRVRNLERDGLAGLRRLSENVQAYVAV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgctgctgttgatgcctcggggctgagcaccgatctggtgcgctcctacctccgc
gacatcggtcgcgtaccgctgctctcccacgagcaggagatcaccttgggccgccaggtg
caggagctggtggcgttagaggagctcgagcaagagctggagatgcgtgctggtggctcc
aagcccgaccatgagcagctggcaaaggcggctcagctcacccctcagcagctcaaaaag
cgtctgcgctccggccaacgggcgaaggagcggatggtggcggccaatctgcgcctcgtg
gtgagcgtggcgaagaaatacaccaagcggaacatggaactcctggacctgatccaggag
ggcacgatcggcctggtgcggggcgtggagaagttcgaccccacccgcggctacaagttc
tccacttatgcctattggtggatccgccagggcattacgcgggcgatcgcggagaagagc
cgcacgattcgcctgccgatccacatcactgaaacgctgaacaagctcaagaaaggccag
cgggaactgagccaggagttgggccgcaccccaacggtgacggagctggcggagtttgtg
gagctgccggaggaggaggtgaaggatctgctctgccgcgcccgtcagcccgtgagcctg
gaaaccaaggtgggcgacggcgacgacaccgaactactcgacctgctggcagccgacggg
acccagccggaagagctggtggatggcgagtgcctgcgcagcgacatgcgtgatctgctt
gagcaactgcccgacttgcagtgccgcgtgctcaagatgcgctacggcatcccctgcgcc
gatgtgcccgatcctgatgagccgatgagccttaccggcatcggccgcatcctcgggatg
agccgcgaccgcgtgcgcaacctcgagcgcgatggcctggcgggcctgcgacgtctcagc
gaaaacgtgcaggcctacgtggcggtttga
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