Synechococcus sp. RCC307: SynRCC307_1839
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Entry
SynRCC307_1839 CDS
T00523
Symbol
rnz
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
syr
Synechococcus sp. RCC307
Brite
KEGG Orthology (KO) [BR:
syr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syr03016
]
SynRCC307_1839 (rnz)
Enzymes [BR:
syr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SynRCC307_1839 (rnz)
Transfer RNA biogenesis [BR:
syr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SynRCC307_1839 (rnz)
Prokaryotic type
SynRCC307_1839 (rnz)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
CAK28742
CyanoBase:
SynRCC307_1839
UniProt:
A5GV33
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All DBs
Position
1602489..1603490
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AA seq
333 aa
AA seq
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MPWHHQSWGSQPAPLQVTFLGTSSGVPSRSRNVSAVALRLPQRADLWLFDCGEATQHQFL
RSELRVSQLRRIFITHMHGDHVFGLPGLLASLGMAGTCDGVDLYGPEPLEAFVLSALQHS
ATRIGYPLRFHPVESAANSGEPLLIDGEFSVCCAPLKHRVPAFGYRVQQSERPGRFDIAK
AKAMRLPPGPEFARLKAGETVTFADGRRIDGRELCGPRQPGCSVVYCTDTVFSERAVALA
QGADLLIHEATFSHRDAAMAYQRQHSTSTMAAQTAAEAGVQQLALTHLSPRYVPGATESP
DDLLQEAKAIFPNTVLAKDFLSIEVSTMACNSL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtggcaccatcaaagctggggcagccaaccagcgccattgcaggtcacttttctc
ggcaccagttccggagtcccgagccgcagccgcaatgtctctgcggtggctctgcgtctg
ccgcagcgcgccgacctgtggctgttcgactgcggcgaagccacccaacaccaattcctg
cgcagcgagctgcgtgtctcccagctgaggcgcatcttcatcacccacatgcatggagac
catgtcttcggcttgccaggcttgctggccagcctgggcatggcgggaacctgtgatggg
gtcgacctttatggccccgaacccctggaggcctttgtgctgagtgccctgcagcactcc
gccactcggattggctatcccctgcgctttcacccggtggaatcagcggccaacagcggc
gaacccctgctcatcgatggggagttcagcgtctgctgcgcaccgctcaaacaccgggtg
cctgcctttggctatcgcgtgcagcaaagcgagcgcccaggccgctttgacattgccaag
gccaaagcgatgcggctgccgccagggccagagtttgcgcgcctcaaagccggagaaacc
gtcacctttgccgacgggcggcgcatcgatggccgcgagctctgcgggcccaggcagccg
ggatgctccgttgtttattgcaccgacacggtgttcagcgagcgcgctgtggccttggcc
caaggggctgatctgctcatccacgaagccaccttttcccatcgcgatgccgcgatggcc
tatcaacgccagcactccaccagcaccatggcggcgcagaccgcagcggaagcaggcgtg
cagcaactggccctcacgcacctgagcccgcgctacgtgcctggggcgaccgaaagcccg
gatgatttgttgcaggaagccaaggcgatctttcccaacaccgtgctggccaaggacttc
ctcagcatcgaagtgagcaccatggcctgcaacagtctgtga
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