Parasynechococcus marenigrum: SYNW0914
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Entry
SYNW0914 CDS
T00144
Symbol
recC
Name
(GenBank) probable exodeoxyribonuclease V, gamma subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYNW0914 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW0914 (recC)
Enzymes [BR:
syw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SYNW0914 (recC)
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SYNW0914 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CAE07429
CyanoBase:
SYNW0914
UniProt:
Q7U7R7
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All DBs
Position
871211..874432
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AA seq
1073 aa
AA seq
DB search
MLTLYRSNRAEFLATLLARQLLEERPDPFETVEVLVNTWPTSRWLGEQLATANGISSLVR
FPFPGSRLRQLVRRVLDLPDQEQDPWRATSLVWAVLEQMPALLEQPVARPLQLWLQQRDG
GDASGLSRDRWQLARAIADAFDDYALYRPETLHSWIQSQGSRAASAETDWQPWLARQLAA
SLHRQPFGLQVQSAVERLRSGAVDPQVLPKVIRLFGISALAPVQVELIQALSGSTDVQVY
LLTPCRDLWQRCGNRREQLGATWTEPPDGGWLQQAPRLEAMLGRMGAEFQQLLEGSGDSQ
LGEVREGDLFADPVRIAEGEGRSATLLEQLQQQLVEPGCRESLDRDLDDRSLLFQAAPGP
WREVQLVRDQVLQWLAADPELEPRDVLVMTPQIDRYAPLLSSVLNDRDAIGVDLPWRLTD
RSQQSTPGLTMVMLELLDLASGRLTATGLERLLANPALQTQQGLSGTEASALTRCLQRTG
FRWGLDARERGGDETHSLSWCLDRWLLGLALPQRDGLAPGGAAPFHQDLDPQRLVRWWSV
LDRLVRWLQQLRRPRTSTAWVELLQAVLEDLFADGGAWSWERQGWSAALAEWQQRAASCS
LELEVAVAAEVLAEALSVDSGRFGHRSGALTVSALEPMRAIPHKVIVLMGLDDGVFPRVD
QRPGFHLLEQRRWLGDPRGGDQDRYVLLEALMSARRHLLISWCGRNEHTGEPRPAAAPVE
QWLQDLTRQLGTEASAGLCIEPDPNPLDRSNFQVAGHGQPLSCDRRQLAARRWLDQHQSH
AATAGLAWPLHWSAPDPEVTIDPRSDEELLQWLVDPQSAWLRQLGLHPAERVDPVEDLEA
LTLSSLLQAQVLNQDLEDHLLAAETPAWCETLAGQGVFPPAAGAQLEEGILSHRLQALQL
QLDRLGRCSRQGTLLMAGDIQVVVQPGRFTPRGLMRGWLQHLRLCADDAVFGGSAVIARA
DKGDDAKPHVRWGRLEPAVAQAQLLTLQRLAQQGQHQCWPVPPRSGWLLMSRDHYKAGSG
VAAFQDGWIRERQDPQQRLCFGADAEADQLLQSQGFEQACALLYKPMLQALVH
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacgctttaccgcagcaatcgggctgaattcctggccaccttgctggcccgtcag
ttgctggaggagcgaccggaccccttcgagacggtggaggtgttggtgaacacctggccc
accagccgctggcttggcgagcagctcgccacggctaatggcatcagttcgctggtgcgc
tttcccttccccggcagtcgtttgcggcagctggtgcgacgggtgctcgacctccccgat
caggagcaggacccctggcgggccacctccctggtctgggctgtgctggagcagatgccg
gccctgttggagcagcccgttgcccgaccgctgcagctctggttgcagcaacgagatggt
ggtgatgcttcggggctgagccgggatcgttggcagctggctcgcgccatcgccgatgcc
ttcgacgactacgcgctgtatcggcccgaaaccttgcacagctggattcagagccagggc
agccgtgctgcatccgcagaaacggactggcaaccgtggctggccaggcagctggcggcg
tctctgcatcgccaaccgttcggcttgcaggtgcagtccgctgtggagcggctgcgctcc
ggcgccgtggacccccaggtgctgccaaaggtgatccgtctgttcgggatcagtgccctg
gcgccggtgcaggtggaactgatccaggccctctcaggcagcaccgacgttcaggtgtat
ctgctcaccccctgccgcgatctctggcagcgctgcggcaatcgccgtgagcagctggga
gcaacctggacagagccccccgatgggggctggttacagcaggcaccgcgattggaggcc
atgctcggacggatgggggccgagttccagcagctgctggagggcagtggcgacagtcag
ctgggggaggtgcgcgagggggatctgtttgccgatcccgtccgcattgctgagggggaa
ggtcgctccgccacgttgctggagcagttgcagcagcagctggtggaaccgggctgccgt
gaatctctcgatcgagatcttgacgaccgctccttgttgttccaggccgctccagggccg
tggcgggaggtgcaactggtgcgcgatcaggtgttgcagtggctggcggcggatccagag
cttgagcctcgggatgtgttggtgatgaccccgcagatcgaccgttatgccccactcctg
agctctgtgctcaacgaccgtgatgcgattggagtggatctgccctggcgtctcaccgat
cgaagccagcagagcacccctggcctgacgatggtgatgctggagttgctggacctggcg
tcaggtcgcctgaccgccactgggctggaacggttgttggccaatcccgccctacagacg
caacaggggctcagcggtactgaggcgtctgccttgacccgctgcctgcagcgcacgggc
ttccgctgggggctcgatgcccgggagcggggcggtgatgagacccacagcctcagttgg
tgtctggatcgttggttgctgggtctggcgctgccgcaacgggatggcctggcacccggc
ggggcggccccgtttcatcaggatctcgatccgcagcggctggtgcgctggtggagcgtt
ctggatcggctggtgcgctggttgcagcagctgcgacgaccacggacctcgacggcctgg
gtggagttgctgcaggccgtgctggaggatctcttcgctgacggcggtgcctggagctgg
gagcgtcagggttggtctgcggccctggcggaatggcagcaacgggcagcctcctgctcg
ctggagctcgaggtggcggtggcagctgaggtgctggcggaggccctgtcggtggacagt
ggccgcttcgggcatcgcagtggtgcgctcacggtgagtgcgctggagccgatgcgggcg
atcccccacaaggtgattgtgctgatgggtctcgacgacggggtgttcccccgtgtggat
caacggcctgggttccatctgttggagcagcgccgctggctcggcgacccgcgcgggggt
gatcaggaccgttatgtgctgctggaggcgctgatgtccgcgcggcgtcatctgctgatc
agttggtgcggccgcaatgaacacaccggtgagcctcggccggctgctgctccggtggaa
cagtggttgcaggacctgacaaggcagctgggcactgaggccagcgcggggctgtgcatc
gagccggatcccaacccactggatcgcagcaactttcaggttgccggccatggccagccc
ctcagctgtgatcgccgccaactggcggcgcgacgctggctggaccagcatcagagccat
gctgcgacggccggcctggcctggccgctgcactggagtgcgccggaccctgaggtcacg
atcgacccacgcagcgatgaggagctgttgcagtggctggtggaccctcagtcagcctgg
ctgcggcagctgggcctccacccagctgagcgggtggatcctgtggaggatctcgaggcc
ctgacgctcagcagcctgctgcaggcccaggtgttgaatcaggatctggaggatcacctg
ctggcggccgagacgccggcatggtgcgagacgttggcgggccagggggtgtttcccccc
gcagcaggggctcagctggaggagggaatcctcagccatcgactccaggcgttgcagctg
cagctggaccggctcggacgttgcagccgccagggaacgctgctgatggccggcgacatt
caggtggtggttcagcccggtcgtttcaccccccgtggtctgatgcggggctggttgcag
catctaaggctctgcgcagacgatgctgtcttcggcgggagcgccgtcatcgctcgggca
gacaagggcgatgacgccaagccccatgtgcgttggggacgtctcgaacctgcggtggcc
caggcccagctgctgacgctgcagcggttggctcagcaggggcagcatcagtgctggccg
gttccccccagaagtggctggctgttgatgagcagggatcactacaaggccggcagcggc
gtcgccgcttttcaagacggctggatccgggagcgccaggacccccagcagcggctgtgc
ttcggcgccgatgctgaggctgaccagctgttgcagagccagggcttcgagcaggcatgt
gcgttgctctacaaaccgatgctgcaggccttggtgcactga
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