Parasynechococcus marenigrum: SYNW1202
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Entry
SYNW1202 CDS
T00144
Symbol
zam
Name
(GenBank) putative acetazolamide conferring resistance protein Zam
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SYNW1202 (zam)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syw03019
]
SYNW1202 (zam)
03016 Transfer RNA biogenesis [BR:
syw03016
]
SYNW1202 (zam)
Enzymes [BR:
syw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SYNW1202 (zam)
Messenger RNA biogenesis [BR:
syw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SYNW1202 (zam)
Transfer RNA biogenesis [BR:
syw03016
]
Prokaryotic type
tRNA degradation factors
SYNW1202 (zam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
RNase_II_C_S1
RecA_dep_nuc
Motif
Other DBs
NCBI-ProteinID:
CAE07717
CyanoBase:
SYNW1202
UniProt:
Q7U6Y4
LinkDB
All DBs
Position
complement(1191642..1193996)
Genome browser
AA seq
784 aa
AA seq
DB search
MKAGFDPHTMKFSVADLLDQLSYDQPVLQTTLAKILKLSNKADKERLDLAIDGLSKLGVL
SRQGDEGLVRYQAEDLIDARLRCSSKGFCFAIRDDGGDDVYIRDHQLNHAWNGDRVLVRV
TREGGRRRSPEGGVQCILERSTQSLLAQVERQQERLVAAPLDDRMLTSIELPADAEVHVS
EESATTVVEVKIDRYPIAQHPAQGHVARPLPLNAGPAADRDLLLTKAGLHERPAAPRASV
KSPPSKGRTDLTDQPSLLLCSWQHRDAPPLPAVYVEARDGGCRLWLHAPSVAERFGQGNS
LDLWIRDRADAICLGEDWQPLLTPALTKACRLKAGESSDALTVRLDIDANGHLTDWEFML
STIRPVADISTAQLRALAERKPKSRSIPAALKPIKDQLGQLETLMFCADCLMGHEQSAGA
VALDLRPPQIDALGDLRWADPSGQAHRWTDVIDRTDPNSILQPLLRAADRAWGQHRAALQ
LPGIAWISSEPDATVLTDVAKTAVALDLPLELDDDGSPTAQELITVFAESDQRRVLEQQL
SHALAQPQFQAELKTPETSDDDTTDMSAALTPWCCGSLSYAQLANQQVIQMLLNDGKDRP
NVRQKERLNLGRRGCADDLQWSLFTGAQEEKLTNIVSQRLVQRLNSRRRQVLELQRDLLA
MVQARSAEPLVGQEAAGHVSGVQSYGFFVEVGETRVEGLVHVSSLNDDWYEYRSRQNRLV
GRKNRRAYQLGDQVRVRVIKVDVLRNQIDLEVIPEPTADEGDNNADSSTVESPEQPMAVT
LSGI
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccggattcgatccacacaccatgaagttctcggtcgctgacctcctggatcag
ctctcctacgaccagccggttctccagaccacgctggccaagatcctcaagctgtccaac
aaagctgataaagaacgtctggacttggccattgacgggttgagcaagctcggtgtcctc
agccgtcagggagacgaaggcctggtgcgctatcaagctgaggatcttattgacgcgcgg
ctgcgttgcagcagcaaaggtttttgctttgccatccgggatgacggtggagatgacgtt
tacatccgcgaccatcagctgaatcacgcctggaatggcgatcgcgtcctggtccgggtg
acccgggaaggcggtcgacgacgatctccggaaggcggtgtgcaatgcattctcgaacgc
agcacccagtcattgctggcccaggttgaacggcagcaggagcggctggtggcggcaccg
ttggatgaccgcatgctcaccagcatcgagctccccgcagatgcggaagtgcacgtatcg
gaggaatcagcaacgaccgtggtcgaggtcaagatcgatcgttatccaatcgcccagcat
ccagctcaggggcatgtggctcgtcccctgcctctgaatgccggaccagcagccgaccgc
gatttgttgctaaccaaagccggtctgcacgaacggcctgcggcaccgcgtgcctccgtc
aaatccccaccaagcaaagggcggaccgacctgactgaccagccatcgctgttgctatgc
agctggcagcaccgggatgcccctcccctgcccgcggtgtatgtggaagcaagagatggc
ggctgtcgcctttggctgcatgcaccgtcggttgcggaacgctttggccagggcaacagt
cttgatctctggatcagggatcgagctgatgccatttgtctgggggaggactggcaaccg
ctactgactcccgctcttacgaaggcctgtcggctcaaggcgggcgaatccagcgacgcc
ctgacggtgcgactcgacattgatgccaatggccatctgacggactgggagttcatgctc
agcaccatccgtccggtcgccgacatcagcaccgcgcagctccgggccctggcagagcgc
aaacccaagtcgcgcagcatccccgcggcgttgaaaccgatcaaagatcagcttgggcag
ctggagaccctgatgttctgcgccgactgcctgatgggccatgagcaatccgcaggagcc
gttgccctcgacttacgtcccccacagattgacgcgctcggggatctgcgctgggccgat
cccagtggtcaagcgcaccgttggaccgatgtgatcgatcgcaccgatccgaattccatt
cttcaaccgctgctccgggccgccgatcgcgcctggggacaacaccgtgccgcactccag
ctcccaggaatcgcctggatcagcagcgagcctgatgccacggtgctcaccgatgtggcg
aagaccgctgttgcccttgatctccccctcgaactggatgacgacggaagccctacggcg
caggaattgatcacggtcttcgcggagtccgaccagcgtcgggtgctggagcagcaactg
agccatgcattggcccaaccgcaatttcaggccgaactcaagacaccggagacaagcgac
gacgacacaactgatatgagcgcagcactcacaccctggtgctgcggatcattgagctac
gcccagctggccaaccagcaggtcatccagatgctgctgaacgacggtaaggaccgtccc
aatgtccgtcagaaggagcggctcaatcttggtcgacgtggctgtgctgatgatctccag
tggtccctgttcactggcgcacaggaagagaaactcaccaatatcgtgagtcagcgcctg
gttcaacggctcaacagccggcggcgtcaggtgctggagcttcagcgggatctgctggcc
atggtccaggccagatcggcggaaccgctggtaggtcaggaagccgcaggtcatgtgagc
ggcgtgcagagctatggcttttttgttgaggtgggagagacccgcgttgagggacttgtt
cacgtcagctctctcaacgatgactggtacgaataccgctccaggcagaaccgccttgtc
ggccgcaagaaccgacgggcctatcagctaggtgaccaagttcgcgtacgagtgatcaag
gttgacgtgctccgcaatcagatcgatctcgaggtgattcctgagccgacagcggatgag
ggggacaacaacgcagacagcagcaccgtcgaaagccctgagcagccgatggccgtgacc
ctcagcggcatctga
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